Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
vacuole:
16581873
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G245500.1 | Wheat | cytosol | 96.44 | 96.44 |
| TraesCS4D01G068700.1 | Wheat | cytosol | 96.0 | 96.0 |
| Os03t0626800-01 | Rice | cytosol | 93.78 | 93.78 |
| Zm00001d033295_P001 | Maize | cytosol | 92.44 | 92.44 |
| HORVU5Hr1G016320.1 | Barley | cytosol | 90.22 | 90.22 |
| GSMUA_Achr9P12840_001 | Banana | cytosol | 90.22 | 89.82 |
| Solyc07g065820.2.1 | Tomato | cytosol | 86.22 | 88.58 |
| PGSC0003DMT400057342 | Potato | cytosol, extracellular | 85.78 | 88.13 |
| KRH46425 | Soybean | endoplasmic reticulum | 88.44 | 88.05 |
| KRG98442 | Soybean | cytosol | 88.0 | 87.61 |
| CDY67196 | Canola | cytosol | 27.11 | 87.14 |
| PGSC0003DMT400076653 | Potato | cytosol | 86.67 | 87.05 |
| Solyc12g015870.1.1 | Tomato | cytosol | 86.67 | 87.05 |
| PGSC0003DMT400037245 | Potato | cytosol | 85.33 | 86.49 |
| CDX94315 | Canola | cytosol | 86.22 | 85.84 |
| CDX89324 | Canola | cytosol | 86.22 | 85.84 |
| AT5G55990.1 | Thale cress | cytosol, extracellular | 85.78 | 85.4 |
| CDY64981 | Canola | cytosol | 85.78 | 85.4 |
| Bra035598.1-P | Field mustard | cytosol | 85.78 | 85.4 |
| CDX92814 | Canola | cytosol | 85.78 | 85.4 |
| CDY06547 | Canola | cytosol | 85.78 | 85.4 |
| CDY42728 | Canola | cytosol | 85.78 | 85.4 |
| Bra026421.1-P | Field mustard | cytosol | 82.22 | 84.86 |
| AT4G26570.2 | Thale cress | cytosol | 85.33 | 83.48 |
| CDY36774 | Canola | cytosol | 85.33 | 80.67 |
| CDY11963 | Canola | cytosol | 85.33 | 80.67 |
| Bra028949.1-P | Field mustard | cytosol | 78.22 | 80.0 |
| TraesCS4B01G069900.1 | Wheat | cytosol | 89.78 | 77.69 |
| HORVU5Hr1G040030.6 | Barley | cytosol | 76.44 | 75.77 |
| HORVU1Hr1G055300.1 | Barley | cytosol | 61.78 | 64.65 |
| HORVU4Hr1G090270.10 | Barley | cytosol | 60.44 | 62.67 |
| CDX89325 | Canola | plastid | 68.89 | 56.36 |
| HORVU1Hr1G064470.1 | Barley | cytosol | 51.56 | 54.46 |
| HORVU1Hr1G080790.11 | Barley | cytosol | 45.33 | 52.31 |
| CDX94316 | Canola | plastid | 64.0 | 52.17 |
| Bra026422.1-P | Field mustard | cytosol, plastid | 57.78 | 52.0 |
| HORVU1Hr1G080820.4 | Barley | cytosol, nucleus, plastid | 45.33 | 40.32 |
| HORVU1Hr1G080780.4 | Barley | golgi, nucleus | 51.56 | 24.84 |
| VIT_00s0194g00040.t01 | Wine grape | cytosol | 17.33 | 9.63 |
Protein Annotations
| EMBL:AK354808 | EMBL:AK374320 | EnsemblPlants:HORVU4Hr1G011670.1 | EnsemblPlantsGene:HORVU4Hr1G011670 | Gene3D:1.10.238.10 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 |
| PANTHER:PTHR23056:SF57 | PFAM:PF13499 | PFAM:PF13833 | PFscan:PS50222 | PRINTS:PR00450 | SMART:SM00054 |
| SUPFAM:SSF47473 | UniParc:UPI0001B63DED | UniProt:F2CT56 | MapMan:35.1 | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CT56]
Coordinates
chrchr4H:-:36654825..36660144
Molecular Weight (calculated)
25713.7 Da
IEP (calculated)
4.931
GRAVY (calculated)
-0.213
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MLQCLEGVRH LCGVLLKCCH IDLKHPKGLE DPEVLARETV FSVSEVEALY ELFKKISSAV IDDGLINKEE FQLALFKTSK KESLFADRVF DLFDTKHNGI
101: LGFEEFARAL SVFHPSAAPD EKINFSFQLY DLKQQGFIER QEVKQMVVAT LAESGMNLSD EVIESIIDKT FEEADTKHDG KIDKEEWHNL VQRHPSLLKN
201: MTLQYLKDIT TTFPSFVFHS QVADT
101: LGFEEFARAL SVFHPSAAPD EKINFSFQLY DLKQQGFIER QEVKQMVVAT LAESGMNLSD EVIESIIDKT FEEADTKHDG KIDKEEWHNL VQRHPSLLKN
201: MTLQYLKDIT TTFPSFVFHS QVADT
001: MSQCIDGFKH VCSSFFRCFD IDIYKQSGGL GDPELLARET VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRV FDLFDTKHNG
101: ILGFEEFARA LSVFHPNAPI EDKIDFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DEIIESIIDK TFEEADTKHD GRIDKEEWRT LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT
101: ILGFEEFARA LSVFHPNAPI EDKIDFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DEIIESIIDK TFEEADTKHD GRIDKEEWRT LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT
Arabidopsis Description
ATCBL3calcineurin B-like 3 [Source:TAIR;Acc:AT4G26570]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.