Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G068700.1 | Wheat | cytosol | 98.22 | 98.22 |
| HORVU4Hr1G011670.1 | Barley | vacuole | 96.44 | 96.44 |
| Os03t0626800-01 | Rice | cytosol | 95.11 | 95.11 |
| Zm00001d033295_P001 | Maize | cytosol | 92.89 | 92.89 |
| GSMUA_Achr9P12840_001 | Banana | cytosol | 91.56 | 91.15 |
| TraesCS5A01G060600.1 | Wheat | cytosol | 91.11 | 91.11 |
| Solyc07g065820.2.1 | Tomato | cytosol | 87.56 | 89.95 |
| KRH46425 | Soybean | endoplasmic reticulum | 90.22 | 89.82 |
| PGSC0003DMT400057342 | Potato | cytosol, extracellular | 87.11 | 89.5 |
| KRG98442 | Soybean | cytosol | 89.78 | 89.38 |
| Solyc12g015870.1.1 | Tomato | cytosol | 88.44 | 88.84 |
| PGSC0003DMT400076653 | Potato | cytosol | 88.44 | 88.84 |
| CDY67196 | Canola | cytosol | 27.56 | 88.57 |
| PGSC0003DMT400037245 | Potato | cytosol | 86.67 | 87.84 |
| CDY42728 | Canola | cytosol | 87.11 | 86.73 |
| CDX94315 | Canola | cytosol | 87.11 | 86.73 |
| CDX92814 | Canola | cytosol | 87.11 | 86.73 |
| CDX89324 | Canola | cytosol | 87.11 | 86.73 |
| AT5G55990.1 | Thale cress | cytosol, extracellular | 86.67 | 86.28 |
| Bra035598.1-P | Field mustard | cytosol | 86.67 | 86.28 |
| CDY64981 | Canola | cytosol | 86.67 | 86.28 |
| CDY06547 | Canola | cytosol | 86.67 | 86.28 |
| Bra026421.1-P | Field mustard | cytosol | 83.11 | 85.78 |
| AT4G26570.2 | Thale cress | cytosol | 86.67 | 84.78 |
| TraesCS5A01G124700.1 | Wheat | cytosol | 83.56 | 83.19 |
| CDY36774 | Canola | cytosol | 86.22 | 81.51 |
| CDY11963 | Canola | cytosol | 86.22 | 81.51 |
| Bra028949.1-P | Field mustard | cytosol | 79.11 | 80.91 |
| TraesCS4B01G069900.1 | Wheat | cytosol | 90.67 | 78.46 |
| TraesCS1A01G215800.1 | Wheat | cytosol | 62.22 | 65.12 |
| TraesCS5A01G545500.2 | Wheat | cytosol | 60.89 | 63.72 |
| CDX89325 | Canola | plastid | 70.67 | 57.82 |
| CDX94316 | Canola | plastid | 65.78 | 53.62 |
| Bra026422.1-P | Field mustard | cytosol, plastid | 59.11 | 53.2 |
| TraesCS1A01G352200.1 | Wheat | cytosol | 52.0 | 52.7 |
| TraesCS1A01G261200.1 | Wheat | cytosol | 52.0 | 52.23 |
| TraesCS3A01G053300.1 | Wheat | golgi | 57.78 | 44.52 |
| TraesCS3A01G208300.2 | Wheat | cytosol, mitochondrion | 58.22 | 36.09 |
| VIT_00s0194g00040.t01 | Wine grape | cytosol | 18.67 | 10.37 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G245500.1 | EnsemblPlantsGene:TraesCS4A01G245500 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF57 | PFAM:PF13499 |
| PFAM:PF13833 | PFscan:PS50222 | PRINTS:PR00450 | SMART:SM00054 | SUPFAM:SSF47473 | MapMan:35.1 |
Description
No Description!
Coordinates
chr4A:+:555746061..555750257
Molecular Weight (calculated)
25641.7 Da
IEP (calculated)
4.619
GRAVY (calculated)
-0.214
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MLQCLEGVRH LGGLLLKCCG IDLKQPKGLE DPEVLARETV FSVSEVEALY ELFKKISSAV IDDGLINKEE FQLALFKTSK KESLFADRVF DLFDTKHNGI
101: LGFEEFARAL SVFHPSAAPD EKIDFSFQLY DLKQQGFIER QEVKQMVVAT LAESGMNLSD EVIESIIDKT FEEADTKHDG KIDKEEWRNL VLRHPSLLKN
201: MTLQYLKDIT TTFPSFVFHS QVDDT
101: LGFEEFARAL SVFHPSAAPD EKIDFSFQLY DLKQQGFIER QEVKQMVVAT LAESGMNLSD EVIESIIDKT FEEADTKHDG KIDKEEWRNL VLRHPSLLKN
201: MTLQYLKDIT TTFPSFVFHS QVDDT
001: MMMQCLDGLK HLALILLTCC DADPPKVRQN PKDVARGTVF TVNEIEALYE LFKSISKNGL IDKEQFQLVL FKMNTTRSLF ADRVFDLFDT KNTGILDFEA
101: FARSLSVFHP NAKFEDKIEF SFKLYDLNQQ GYIKRQEVKQ MVVRTLAESG MNLSDHVIES IIDKTFEEAD TKLDGKIDKE EWRSLVLRHP SLLQNMSLQH
201: LKDVTKTFPN FVFHTIVTDT PSELDG
101: FARSLSVFHP NAKFEDKIEF SFKLYDLNQQ GYIKRQEVKQ MVVRTLAESG MNLSDHVIES IIDKTFEEAD TKLDGKIDKE EWRSLVLRHP SLLQNMSLQH
201: LKDVTKTFPN FVFHTIVTDT PSELDG
Arabidopsis Description
CBL6Calcineurin B-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P6]
SUBAcon: [extracellular,cytosol]
SUBAcon: [extracellular,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.