Factsheet for TraesCS6D01G141000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G215800.1
TraesCS1B01G229300.1
TraesCS4B01G379200.1
TraesCS5A01G545500.2
TraesCSU01G129500.1
TraesCSU01G178500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G57630.1	TraesCS1A01G215800.1	AT5G47100.1	14730064
AT5G57630.1	TraesCS1B01G229300.1	AT5G47100.1	14730064
AT5G57630.1	TraesCS4B01G379200.1	AT5G47100.1	14730064
AT5G57630.1	TraesCS5A01G545500.2	AT5G47100.1	14730064
AT5G57630.1	TraesCSU01G129500.1	AT5G47100.1	14730064
AT5G57630.1	TraesCSU01G178500.1	AT5G47100.1	14730064

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G179100.1	Wheat	peroxisome	96.41	97.95
HORVU6Hr1G030150.2	Barley	cytosol	95.29	96.15
Os02t0178000-01	Rice	cytosol, mitochondrion	76.23	77.98
TraesCS6A01G151000.1	Wheat	cytosol	86.55	72.97
GSMUA_Achr1P10280_001	Banana	cytosol	63.45	61.52
Bra006809.1-P	Field mustard	cytosol	50.9	58.81
Bra002712.1-P	Field mustard	cytosol	53.14	58.66
CDY25896	Canola	cytosol	53.81	57.69
AT5G57630.1	Thale cress	cytosol	53.14	56.97
CDX88633	Canola	cytosol	52.47	56.93
CDY11858	Canola	cytosol	53.36	55.61
VIT_11s0052g01700.t01	Wine grape	cytosol	57.17	54.6
KRH02907	Soybean	cytosol	55.61	53.1
CDY49727	Canola	cytosol	45.07	50.76
TraesCS4D01G126200.1	Wheat	cytosol	43.27	43.96
TraesCS4D01G179700.2	Wheat	mitochondrion	42.6	42.32
TraesCS2D01G252600.1	Wheat	cytosol	42.83	42.16
TraesCS4D01G316500.1	Wheat	cytosol	41.7	41.8
TraesCS3D01G203000.4	Wheat	cytosol	41.93	41.65
TraesCS2D01G097700.1	Wheat	cytosol, mitochondrion	41.48	41.39
TraesCS7D01G374400.2	Wheat	mitochondrion	40.81	40.81
TraesCS2D01G155700.1	Wheat	cytosol	39.91	39.47
TraesCS1D01G082200.1	Wheat	cytosol	39.01	37.42
TraesCS3D01G492100.1	Wheat	cytosol	25.11	37.09
TraesCS1D01G082600.1	Wheat	cytosol	38.56	36.91
TraesCS1D01G082500.1	Wheat	cytosol	38.56	35.83
TraesCS1D01G353300.1	Wheat	cytosol	31.17	27.8
TraesCS3D01G282800.1	Wheat	cytosol	30.72	27.24
TraesCS4D01G196100.1	Wheat	cytosol	30.49	26.72
TraesCS3D01G491900.2	Wheat	plasma membrane	28.92	21.94
TraesCS3D01G491800.1	Wheat	mitochondrion	14.8	21.02

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.5.3	Gene3D:3.30.310.80	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005829	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009705	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0071470	GO:GO:0071472
InterPro:IPR000719	InterPro:IPR018451	InterPro:Kinase-like_dom_sf	InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069
PFAM:PF03822	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816
PANTHER:PTHR24343	PANTHER:PTHR24343:SF123	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS6D01G141000	EnsemblPlants:TraesCS6D01G141000.1	TIGR:cd12195	:	:

Description

No Description!

Coordinates

chr6D:+:110745393..110748206

Molecular Weight (calculated)

49656.5 Da

IEP (calculated)

6.596

GRAVY (calculated)

-0.224

Length

446 amino acids

Sequence
(BLAST)

001: MVLAESIGKY RVGRTIGEGA FAKVRLAVDA ETGGCVAVKV IDRSTVLRNN LMYQVKREIG AMRLLNHPNI VKIHEVIATK TKICLVTEYV PGGQLSDKLS
101: YLKRLDEREA KKYFYQLIDA VDYCHRRGVF HRDLKPENLL LDNQGNLKVS DFGLSVLRKP GQLLSTSCGS PCYVAPEVIQ HKTYDGAAAD IWSCGVILFE
201: LLAGYLPFQD CSLIHLYRRI SRAQYALPQW ITLPQKKIIL RILDPSPITR AKINDIFDDE WFQEGYNPSV RRTESDNGDD CVDLDEAGTD SDGSHSTEVR
301: EAGGANPEPE QFINAFRLIA TCRDLDLSGL FQEQKTKLGS PHSVQETLEI ITAAAQDVSL SARRMGSSMV KLQDIRLLSR SMLDLTLSAE VIQVTPAHCV
401: VEVSKSSGDL RAYKEFCTSL SRLLTGRVQQ NGSSSDLETN QLPTLE

Best Arabidopsis Sequence Match ( AT5G57630.1 )
(BLAST)

001: MGLFGTKKIG KYEIGRTIGE GNFAKVKLGY DTTNGTYVAV KIIDKALVIQ KGLESQVKRE IRTMKLLNHP NIVQIHEVIG TKTKICIVME YVSGGQLSDR
101: LGRQKMKESD ARKLFQQLID AVDYCHNRGV YHRDLKPQNL LLDSKGNLKV SDFGLSAVPK SGDMLSTACG SPCYIAPELI MNKGYSGAAV DVWSCGVILF
201: ELLAGYPPFD DHTLPVLYKK ILRADYTFPP GFTGEQKRLI FNILDPNPLS RITLAEIIIK DSWFKIGYTP VYHQLSDSIK DNVAEINAAT ASSNFINAFQ
301: IIAMSSDLDL SGLFEENDDK RYKTRIGSKN TAQETIKKIE AAATYVSLSV ERIKHFKVKI QPKEIRSRSS YDLLSAEVIE VTPTNCVIEI SKSAGELRLY
401: MEFCQSLSSL LTAEVS

Arabidopsis Description

CIPK21CBL-interacting serine/threonine-protein kinase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q94CG0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.