Factsheet for TraesCS6A01G151000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G215800.1
TraesCS1B01G229300.1
TraesCS4B01G379200.1
TraesCS5A01G545500.2
TraesCSU01G129500.1
TraesCSU01G178500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G57630.1	TraesCS1A01G215800.1	AT5G47100.1	14730064
AT5G57630.1	TraesCS1B01G229300.1	AT5G47100.1	14730064
AT5G57630.1	TraesCS4B01G379200.1	AT5G47100.1	14730064
AT5G57630.1	TraesCS5A01G545500.2	AT5G47100.1	14730064
AT5G57630.1	TraesCSU01G129500.1	AT5G47100.1	14730064
AT5G57630.1	TraesCSU01G178500.1	AT5G47100.1	14730064

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G179100.1	Wheat	peroxisome	72.4	87.24
TraesCS6D01G141000.1	Wheat	cytosol	72.97	86.55
HORVU6Hr1G030150.2	Barley	cytosol	71.46	85.52
Os02t0178000-01	Rice	cytosol, mitochondrion	57.84	70.18
GSMUA_Achr1P10280_001	Banana	cytosol	49.34	56.74
Bra006809.1-P	Field mustard	cytosol	39.7	54.4
Bra002712.1-P	Field mustard	cytosol	41.4	54.21
CDY25896	Canola	cytosol	41.97	53.37
CDX88633	Canola	cytosol	41.02	52.8
AT5G57630.1	Thale cress	cytosol	41.4	52.64
CDY11858	Canola	cytosol	41.59	51.4
VIT_11s0052g01700.t01	Wine grape	cytosol	44.42	50.32
CDY49727	Canola	cytosol	37.24	49.75
KRH02907	Soybean	cytosol	43.29	49.04
TraesCS4A01G187300.1	Wheat	cytosol	34.97	42.14
TraesCS4A01G126800.3	Wheat	mitochondrion	34.4	40.35
TraesCS3A01G200900.1	Wheat	cytosol	33.84	39.87
TraesCS2A01G251800.1	Wheat	cytosol	34.4	39.48
TraesCS5A01G492000.1	Wheat	mitochondrion	33.27	39.46
TraesCS2A01G098300.1	Wheat	cytosol, mitochondrion	33.27	39.37
TraesCS7A01G377600.1	Wheat	mitochondrion	32.89	39.01
TraesCS2A01G150600.2	Wheat	cytosol	30.62	35.92
TraesCS1A01G080500.2	Wheat	cytosol	31.19	35.33
TraesCS1A01G080700.1	Wheat	cytosol	31.19	35.03
TraesCS1A01G080600.1	Wheat	cytosol	30.81	34.98
TraesCS4A01G108700.1	Wheat	cytosol	23.06	34.86
TraesCS1A01G350500.1	Wheat	cytosol	25.14	26.44
TraesCS3A01G282800.1	Wheat	cytosol	24.95	26.24
TraesCS4A01G108800.1	Wheat	cytosol	24.76	25.74

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.5.3	Gene3D:3.30.310.80	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005829	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009705	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0071470	GO:GO:0071472
InterPro:IPR000719	InterPro:IPR018451	InterPro:Kinase-like_dom_sf	InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069
PFAM:PF03822	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR24343
PANTHER:PTHR24343:SF123	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS6A01G151000	EnsemblPlants:TraesCS6A01G151000.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6A:+:135053305..135067604

Molecular Weight (calculated)

59025.7 Da

IEP (calculated)

8.144

GRAVY (calculated)

-0.233

Length

529 amino acids

Sequence
(BLAST)

001: MYAVDERETH RASPFYRAVV HAVDGRADGQ TATGSCARKS RCHGYFLPKP PTTFPLSSHL RFTVPSVVHY HHRQAHIPVQ PLLDQGLLLG TSKMVLAESI
101: GKYRVGRTIG EGAFAKVRLA VDAETGGCVA VKVIDRSTVL RNNLMYQVKR EISAMRLLNH PNIVKIHEVI ATKTKICLVM EYVPGGQLSD KLVRQTSSSS
201: NSSWLLSRCY LKRLDEREAK KYFYQLIDAV DYCHRRGVFH RDLKPENLLL DNQGNLKVSD FGLSVLRKLR DLWGWTEACF STSVSTSCGS PCYVAPEVIQ
301: HKTYDGAAAD IWSCGVILFE LLAGYLPFQD CSLIHLYRRI SRAQYALPQW ITLPQKKIIL RILDPSPITR AKVNDIFDDE WFQEGYNPSV RRTGSDDGDD
401: CVDLDEAGTD SDGSHSTEVR EAGGANPEPE QFINTFRLIA TCRDLDLSGL FQEQKTKLGS PHSVQETLGI ITAAARDVSL SARRMGSSMV IQVTPAHCVV
501: EVSKSSGDLR AYKEVCQHVN MNTVCSIPF

Best Arabidopsis Sequence Match ( AT5G57630.1 )
(BLAST)

001: MGLFGTKKIG KYEIGRTIGE GNFAKVKLGY DTTNGTYVAV KIIDKALVIQ KGLESQVKRE IRTMKLLNHP NIVQIHEVIG TKTKICIVME YVSGGQLSDR
101: LGRQKMKESD ARKLFQQLID AVDYCHNRGV YHRDLKPQNL LLDSKGNLKV SDFGLSAVPK SGDMLSTACG SPCYIAPELI MNKGYSGAAV DVWSCGVILF
201: ELLAGYPPFD DHTLPVLYKK ILRADYTFPP GFTGEQKRLI FNILDPNPLS RITLAEIIIK DSWFKIGYTP VYHQLSDSIK DNVAEINAAT ASSNFINAFQ
301: IIAMSSDLDL SGLFEENDDK RYKTRIGSKN TAQETIKKIE AAATYVSLSV ERIKHFKVKI QPKEIRSRSS YDLLSAEVIE VTPTNCVIEI SKSAGELRLY
401: MEFCQSLSSL LTAEVS

Arabidopsis Description

CIPK21CBL-interacting serine/threonine-protein kinase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q94CG0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.