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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDY25987
CDY28977
CDY40580
CDY69850

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G57630.1 CDY25987 AT5G47100.1 14730064
AT5G57630.1 CDY28977 AT5G47100.1 14730064
AT5G57630.1 CDY40580 AT5G47100.1 14730064
AT5G57630.1 CDY69850 AT5G47100.1 14730064
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006809.1-P Field mustard cytosol 93.67 99.74
CDY11858 Canola cytosol 97.32 93.46
CDY25896 Canola cytosol 92.21 91.11
AT5G57630.1 Thale cress cytosol 91.97 90.87
CDY49727 Canola cytosol 73.72 76.52
VIT_11s0052g01700.t01 Wine grape cytosol 66.18 58.24
KRH02907 Soybean cytosol 63.02 55.46
Os02t0178000-01 Rice cytosol, mitochondrion 56.45 53.21
TraesCS6B01G179100.1 Wheat peroxisome 56.69 53.08
HORVU6Hr1G030150.2 Barley cytosol 56.93 52.94
GSMUA_Achr1P10280_001 Banana cytosol 59.12 52.83
TraesCS6D01G141000.1 Wheat cytosol 56.93 52.47
CDX93655 Canola cytosol 45.26 43.76
CDY43284 Canola cytosol 44.77 43.19
CDY41846 Canola cytosol 43.8 43.06
CDY37992 Canola cytosol 41.36 42.71
CDY43285 Canola cytosol 43.8 42.35
CDY48189 Canola cytosol, mitochondrion 45.01 42.05
CDY16600 Canola cytosol 45.01 42.05
CDX77058 Canola cytosol, mitochondrion 45.01 42.05
CDX92400 Canola cytosol 45.01 41.95
CDX93653 Canola cytosol 43.31 41.88
CDY26276 Canola mitochondrion 46.96 41.68
CDY63182 Canola mitochondrion 47.2 41.54
TraesCS6A01G151000.1 Wheat cytosol 52.8 41.02
CDY23677 Canola cytosol 39.66 40.85
CDX90013 Canola cytosol 44.04 40.49
CDY15197 Canola cytosol 44.04 40.49
CDY32442 Canola cytosol 43.8 40.45
CDX82366 Canola cytosol 43.55 40.41
CDX92136 Canola cytosol 43.8 40.36
CDX75921 Canola cytosol 43.55 40.32
CDX90240 Canola plastid 46.72 40.25
CDY09107 Canola cytosol 42.58 39.68
CDX77603 Canola plastid 46.47 39.63
CDX98191 Canola plastid 46.47 39.54
CDY36813 Canola cytosol 43.07 39.07
CDY68878 Canola cytosol, plastid 42.34 39.01
CDX95849 Canola plasma membrane 44.04 38.76
CDY44603 Canola cytosol 42.58 38.63
CDY03449 Canola cytosol 42.09 38.19
CDX74460 Canola cytosol 33.58 27.94
CDX74283 Canola cytosol 33.82 27.74
CDX97762 Canola cytosol 33.33 27.73
CDY68292 Canola nucleus 15.57 27.59
CDY49976 Canola cytosol 26.03 27.44
CDY55800 Canola cytosol 33.33 26.81
CDY34697 Canola cytosol 33.33 26.81
CDY43267 Canola cytosol 32.85 26.68
CDY37545 Canola cytosol 32.85 26.68
CDY04058 Canola cytosol 32.36 26.18
CDX85250 Canola cytosol 32.12 25.78
CDY44405 Canola cytosol 32.12 25.73
CDX86386 Canola cytosol 32.12 25.73
CDX91963 Canola plasma membrane 33.58 11.13
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.3Gene3D:3.30.200.20Gene3D:3.30.310.80GO:A0A078DN40EnsemblPlants:CDX88633ProteinID:CDX88633
ProteinID:CDX88633.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00148671001
InterPro:IPR000719InterPro:IPR018451InterPro:Kinase-like_dom_sfInterPro:NAF/FISL_domainInterPro:NAF_domPFAM:PF00069
PFAM:PF03822PIRSF:PIRSF000654ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50816
PANTHER:PTHR24343PANTHER:PTHR24343:SF123InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EE0628SEG:seg:::
Description
BnaA03g10160D
Coordinates
chrLK031856:-:274108..276721
Molecular Weight (calculated)
45651.7 Da
IEP (calculated)
8.719
GRAVY (calculated)
-0.053
Length
411 amino acids
Sequence
(BLAST)
001: MGLFGTKKIG KYEIGRTIGE GNFAKVKLGY DTTNGTYVAV KIIDKALVIQ KGLQSQVQRE IRTMKLLNHP NIVQIHEVIG TKTKICIVME YVAGGQLSDK
101: LCRHKMKESD ARKLFQQLID AVDYCHNRGV YHRDLKPQNL LLDSKGNLKV SDFGLSAVPK SGDMLSTACG SPCYIAPELI MNKGYSGAAV DVWSCGVILF
201: ELLAGYPPFD DHTLVVLYKK ILRADYTFPP AFTGAQKKLI FNILDPNPQR RMKLAEIIIQ DSWFNFGLLC TILKAENVAE INAATASSNF INAFQIIAMS
301: SDLDLSGLLE EQDDKIYKTK IGSKNTAQET IKKIEAAATY ASLSVERIKH FKVKIQPKEI RSRSSFDLLS AEVIEVTPTN CLIEISKSAG ELRLYMEFCQ
401: SLSSLLTAEV S
Best Arabidopsis Sequence Match ( AT5G57630.1 )
(BLAST)
001: MGLFGTKKIG KYEIGRTIGE GNFAKVKLGY DTTNGTYVAV KIIDKALVIQ KGLESQVKRE IRTMKLLNHP NIVQIHEVIG TKTKICIVME YVSGGQLSDR
101: LGRQKMKESD ARKLFQQLID AVDYCHNRGV YHRDLKPQNL LLDSKGNLKV SDFGLSAVPK SGDMLSTACG SPCYIAPELI MNKGYSGAAV DVWSCGVILF
201: ELLAGYPPFD DHTLPVLYKK ILRADYTFPP GFTGEQKRLI FNILDPNPLS RITLAEIIIK DSWFKIGYTP VYHQLSDSIK DNVAEINAAT ASSNFINAFQ
301: IIAMSSDLDL SGLFEENDDK RYKTRIGSKN TAQETIKKIE AAATYVSLSV ERIKHFKVKI QPKEIRSRSS YDLLSAEVIE VTPTNCVIEI SKSAGELRLY
401: MEFCQSLSSL LTAEVS
Arabidopsis Description
CIPK21CBL-interacting serine/threonine-protein kinase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q94CG0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.