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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX74460 Canola cytosol 96.76 96.76
AT5G39440.1 Thale cress cytosol 70.65 70.65
KRH44935 Soybean cytosol 37.45 67.03
TraesCS3D01G492100.1 Wheat cytosol 40.28 65.89
TraesCS3B01G545400.1 Wheat cytosol 40.08 65.56
TraesCS4A01G108700.1 Wheat cytosol 45.95 64.86
CDX85250 Canola cytosol 66.8 64.45
CDX86386 Canola cytosol 66.6 64.13
CDY04058 Canola cytosol 65.18 63.39
CDY44405 Canola cytosol 65.79 63.35
CDY37545 Canola cytosol 62.75 61.26
CDY43267 Canola cytosol 62.55 61.07
CDY55800 Canola cytosol 62.35 60.27
CDY34697 Canola cytosol 62.35 60.27
CDX74283 Canola cytosol 60.73 59.88
Zm00001d028733_P003 Maize cytosol 60.53 58.74
Os08t0484600-01 Rice cytosol 60.53 58.74
KXG39612 Sorghum cytosol 60.93 58.67
TraesCS3B01G545300.2 Wheat cytosol 51.82 58.31
TraesCS4D01G196100.1 Wheat cytosol 59.92 58.15
TraesCS4A01G108800.1 Wheat cytosol 59.92 58.15
TraesCS4B01G195900.1 Wheat cytosol 59.92 57.7
HORVU4Hr1G056610.3 Barley cytosol 59.72 57.39
TraesCS3B01G544400.2 Wheat cytosol 49.8 55.66
TraesCS3B01G544700.1 Wheat cytosol 57.49 55.47
TraesCS3B01G544300.1 Wheat endoplasmic reticulum, vacuole 52.23 55.36
Os03t0289100-02 Rice plasma membrane 60.73 54.74
HORVU3Hr1G107970.1 Barley cytosol 57.49 51.82
HORVU3Hr1G107990.1 Barley cytosol 57.09 51.09
HORVU3Hr1G108000.3 Barley cytosol 35.22 50.29
TraesCS3D01G491900.2 Wheat plasma membrane 57.29 48.13
VIT_08s0040g00720.t01 Wine grape cytosol 49.39 44.61
TraesCS3D01G491800.1 Wheat mitochondrion 25.1 39.49
CDY37992 Canola cytosol 29.15 36.18
CDY16600 Canola cytosol 30.77 34.55
CDX92400 Canola cytosol 30.77 34.47
CDY25896 Canola cytosol 28.74 34.13
CDX93653 Canola cytosol 29.15 33.88
CDY48189 Canola cytosol, mitochondrion 30.16 33.86
CDX77058 Canola cytosol, mitochondrion 30.16 33.86
CDY32442 Canola cytosol 30.36 33.71
CDX93655 Canola cytosol 28.95 33.65
CDY43285 Canola cytosol 28.95 33.65
CDY49727 Canola cytosol 26.92 33.59
CDY43284 Canola cytosol 28.95 33.57
CDY41846 Canola cytosol 28.34 33.49
CDX88633 Canola cytosol 27.73 33.33
CDY09107 Canola cytosol 29.76 33.33
CDY15197 Canola cytosol 29.96 33.11
CDX90013 Canola cytosol 29.96 33.11
CDX82366 Canola cytosol 29.55 32.96
CDY26276 Canola mitochondrion 30.77 32.83
CDY11858 Canola cytosol 28.34 32.71
CDX75921 Canola cytosol 29.15 32.43
CDY63182 Canola mitochondrion 30.57 32.33
CDX92136 Canola cytosol 29.15 32.29
CDY68878 Canola cytosol, plastid 29.15 32.29
CDY23677 Canola cytosol 25.71 31.83
CDY03449 Canola cytosol 29.15 31.79
CDY44603 Canola cytosol 28.95 31.57
CDX90240 Canola plastid 30.16 31.24
CDX77603 Canola plastid 30.36 31.12
CDX98191 Canola plastid 30.36 31.06
CDX95849 Canola plasma membrane 29.35 31.05
CDY36813 Canola cytosol 28.34 30.91
CDX91963 Canola plasma membrane 59.92 23.87
CDY68292 Canola nucleus 10.32 21.98
CDY49976 Canola cytosol 16.19 20.51
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.1.1MapMan:27.3.1.1Gene3D:3.30.310.80GO:A0A078E9Q5EnsemblPlants:CDX97762ProteinID:CDX97762
ProteinID:CDX97762.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00105035001InterPro:IPR000719InterPro:IPR001772
InterPro:IPR015940InterPro:KA1/Ssp2_CInterPro:KA1_domInterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF00627
PFAM:PF02149ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50030PFscan:PS50032
PANTHER:PTHR24343PANTHER:PTHR24343:SF156InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF103243
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASInterPro:UBAUniParc:UPI0004EE98ADSEG:seg:
Description
BnaC04g41770D
Coordinates
chrLK031901:+:161865..165736
Molecular Weight (calculated)
56138.4 Da
IEP (calculated)
9.103
GRAVY (calculated)
-0.197
Length
494 amino acids
Sequence
(BLAST)
001: MNGSSSQISS KRKSVLPTYK IGKTLGQGSF AKVKLAVHKT TGHNVAIKIL NREKIKQMGI EAKVEREIKI LRLLMHPHII RQYEVIETPE DIYVVMEYVK
101: AGELFDYIVE KGKLHEDEAR YLFQQIISGV EYCHRNMIAH RDLKPENILM DTKCNIKIAD FGLSNVMHDG HFLKTSCGSP NYAAPEVISG KLYAGPEVDI
201: WSCGVILYAL LCGNLPFDDE NMPGLFSKIK KGEYILPDHL SYAARDLIPR ILTVDPMMRI SIPGIRQHPW FSTKLPPYLA APPLDTTEQA REINEEIIRD
301: VVNIGFVEKH VRESLFNRIQ NEATVAYYLL LDSRRRSPSD YFKSNVNRIS SFNSTIPAQT VAPFAALVNH HLMAGLRPRV SADKKWAVGL QSQARPKDIM
401: TAVFKALQDL KVSWKQIGEY NIKCRWVHQS NISKEKSNMM EAELAMISPT VIKFELQLYK AGEGNYVLDI QRADGPQFLF LDLSVSLLRE LHVI
Best Arabidopsis Sequence Match ( AT5G39440.1 )
(BLAST)
001: MDGSSEKTTN KLVSILPNYR IGKTLGHGSF AKVKLALHVA TGHKVAIKIL NRSKIKNMGI EIKVQREIKI LRFLMHPHII RQYEVIETPN DIYVVMEYVK
101: SGELFDYIVE KGKLQEDEAR HLFQQIISGV EYCHRNMIVH RDLKPENVLL DSQCNIKIVD FGLSNVMHDG HFLKTSCGSP NYAAPEVISG KPYGPDVDIW
201: SCGVILYALL CGTLPFDDEN IPNVFEKIKR GMYTLPNHLS HFARDLIPRM LMVDPTMRIS ITEIRQHPWF NNHLPLYLSI PPLDTIDQAK KIEEEIIQNV
301: VNIGFDRNHV VDSLANRIQN EATVAYHLIL DNRNQNSVPN DPFQSKFKEI SDGIFNSTLP VQNITSHVGH SFSALYGLKS NVKDDKTWTL GLQSQGSPYD
401: IMTEIFKALQ NLKICWKKIG LYNIKCRWVR SFAYYKNHTI EDECAIILPT VIKFEIQLYK VREGKYLLDI LRIDGPQFIF FDLCVAFLRE LGVL
Arabidopsis Description
SnRK1.3Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:Q9FLZ3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.