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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:nucleus
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX92464
CDX92814 plasma membrane, vacuole
CDY11963 plasma membrane, vacuole
CDY25987
CDY28977
CDY32236
CDY34452
CDY36774 plasma membrane, vacuole
CDY40580
CDY42728 plasma membrane, vacuole
CDY46533
CDY56859
CDY64882
CDY69850

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G01140.3 CDY46533 AT1G64480.1 23109687
AT1G01140.3 CDY64882 AT1G64480.1 23109687
AT1G01140.3 CDX92464 AT4G01420.1 23109687
AT1G01140.3 CDY56859 AT4G01420.1 23109687
AT1G01140.3 CDY32236 AT4G16350.1 23109687
AT1G01140.3 CDY34452 AT4G16350.1 23109687
AT1G01140.3 CDX92814 AT4G26570.2 23109687
AT1G01140.3 CDY42728 AT4G26570.2 23109687
AT1G01140.3 CDX92814 AT4G26570.2 23109687
AT1G01140.3 CDY42728 AT4G26570.2 23109687
AT1G01140.3 CDX92814 AT4G26570.2 23109687
AT1G01140.3 CDY42728 AT4G26570.2 23109687
AT1G01140.3 CDY25987 AT5G47100.1 23109687
AT1G01140.3 CDY28977 AT5G47100.1 23109687
AT1G01140.3 CDY40580 AT5G47100.1 23109687
AT1G01140.3 CDY69850 AT5G47100.1 23109687
AT1G01140.3 CDY11963 AT5G55990.1 23109687
AT1G01140.3 CDY36774 AT5G55990.1 23109687
AT1G01140.3 CDY11963 AT5G55990.1 23109687
AT1G01140.3 CDY36774 AT5G55990.1 23109687
AT1G01140.3 CDY11963 AT5G55990.1 23109687
AT1G01140.3 CDY36774 AT5G55990.1 23109687
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra032622.1-P Field mustard cytosol 100.0 52.13
CDY32442 Canola cytosol 100.0 52.13
CDX90013 Canola cytosol 94.83 49.22
CDY15197 Canola cytosol 94.4 48.99
AT1G01140.3 Thale cress cytosol 92.67 47.67
CDY37992 Canola cytosol 79.31 46.23
VIT_15s0048g02740.t01 Wine grape cytosol 68.1 37.71
KRH47824 Soybean cytosol 70.26 37.21
KRH06391 Soybean cytosol 70.26 37.21
GSMUA_Achr5P10310_001 Banana cytosol 69.4 37.1
Zm00001d027455_P001 Maize cytosol 69.4 36.18
Solyc05g047600.2.1 Tomato cytosol 68.1 35.03
TraesCS4B01G319900.1 Wheat cytosol 66.81 34.99
EER92947 Sorghum cytosol, plastid 67.24 34.9
HORVU4Hr1G083080.1 Barley cytosol 66.81 34.83
TraesCS5A01G492000.1 Wheat mitochondrion 66.81 34.75
TraesCS4D01G316500.1 Wheat cytosol 66.38 34.61
KRH68952 Soybean cytosol 65.09 34.32
Zm00001d048460_P001 Maize cytosol 68.53 34.12
CDY16600 Canola cytosol 57.76 30.45
CDX92400 Canola cytosol 57.76 30.39
PGSC0003DMT400035574 Potato cytosol, plastid 52.59 29.9
CDY26276 Canola mitochondrion 59.48 29.81
CDY63182 Canola mitochondrion 59.48 29.55
CDX77603 Canola plastid 60.78 29.25
CDX98191 Canola plastid 60.78 29.19
CDX90240 Canola plastid 59.05 28.72
CDY48189 Canola cytosol, mitochondrion 54.31 28.64
CDX77058 Canola cytosol, mitochondrion 54.31 28.64
Os03t0126800-00 Rice plasma membrane 58.62 28.45
CDY09107 Canola cytosol 53.02 27.89
CDY49976 Canola cytosol 45.26 26.92
KRH45118 Soybean plasma membrane 52.59 26.12
CDY36813 Canola cytosol 44.4 22.74
CDY44603 Canola cytosol 43.53 22.3
CDY68878 Canola cytosol, plastid 41.81 21.75
CDY03449 Canola cytosol 41.81 21.41
CDX93655 Canola cytosol 37.93 20.71
CDY43285 Canola cytosol 37.07 20.24
CDY43284 Canola cytosol 37.07 20.19
CDY23677 Canola cytosol 34.48 20.05
CDX93653 Canola cytosol 36.64 20.0
CDX82366 Canola cytosol 37.93 19.86
CDX75921 Canola cytosol 37.93 19.82
CDX92136 Canola cytosol 37.5 19.51
CDY41846 Canola cytosol 34.48 19.14
CDX95849 Canola plasma membrane 37.93 18.84
CDY25896 Canola cytosol 31.47 17.55
CDY11858 Canola cytosol 30.17 16.36
CDX88633 Canola cytosol 27.59 15.57
CDY49727 Canola cytosol 22.84 13.38
CDX74460 Canola cytosol 22.84 10.73
CDX97762 Canola cytosol 21.98 10.32
CDX74283 Canola cytosol 20.69 9.58
CDY04058 Canola cytosol 20.26 9.25
CDX85250 Canola cytosol 20.26 9.18
CDX86386 Canola cytosol 20.26 9.16
CDY44405 Canola cytosol 20.26 9.16
CDY37545 Canola cytosol 19.4 8.89
CDY43267 Canola cytosol 19.4 8.89
CDY34697 Canola cytosol 18.97 8.61
CDY55800 Canola cytosol 18.97 8.61
CDX91963 Canola plasma membrane 19.83 3.71
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
Gene3D:3.30.310.80MapMan:50.2.7GO:A0A078JSB7UniProt:A0A078JSB7EnsemblPlants:CDY68292ProteinID:CDY68292
ProteinID:CDY68292.1InterPro:Ca/CaM-dep_Ca-dep_prot_KinaseGO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00072774001InterPro:IPR018451InterPro:Kinase-like_dom_sfInterPro:NAF/FISL_domainInterPro:NAF_domPFAM:PF03822
PFscan:PS50816PANTHER:PTHR43895PANTHER:PTHR43895:SF11SUPFAM:SSF56112UniParc:UPI0004EDB081SEG:seg
Description
BnaCnng58360DBnaCnng58360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JSB7]
Coordinates
chrLK037116:+:105..1545
Molecular Weight (calculated)
26231.1 Da
IEP (calculated)
6.310
GRAVY (calculated)
-0.614
Length
232 amino acids
Sequence
(BLAST)
001: MAGYLPFDEP NLMTLYKRIC KAEFSCPSWF SPGAKEVIKR ILDPSPITRI SIAELLEDEW FKQGYKPPSF GQDDEDITID DVDAAFSNSK ESLVTEKKAK
101: PESMNAFELI SSSNSLENLF EKQAQLVKKE TRFTSQRPAS EIMSKMEETA KPLGFNVRKD KYKIKMKGDK SGRKGQLSVA TEVFEVAPSL HVVELRKTGG
201: DTLEFHKFYK NFSSGLKDVV WNTDGAPEEH KA
Best Arabidopsis Sequence Match ( AT1G01140.1 )
(BLAST)
001: MSGSRRKATP ASRTRVGNYE MGRTLGEGSF AKVKYAKNTV TGDQAAIKIL DREKVFRHKM VEQLKREIST MKLIKHPNVV EIIEVMASKT KIYIVLELVN
101: GGELFDKIAQ QGRLKEDEAR RYFQQLINAV DYCHSRGVYH RDLKPENLIL DANGVLKVSD FGLSAFSRQV REDGLLHTAC GTPNYVAPEV LSDKGYDGAA
201: ADVWSCGVIL FVLMAGYLPF DEPNLMTLYK RICKAEFSCP PWFSQGAKRV IKRILEPNPI TRISIAELLE DEWFKKGYKP PSFDQDDEDI TIDDVDAAFS
301: NSKECLVTEK KEKPVSMNAF ELISSSSEFS LENLFEKQAQ LVKKETRFTS QRSASEIMSK MEETAKPLGF NVRKDNYKIK MKGDKSGRKG QLSVATEVFE
401: VAPSLHVVEL RKTGGDTLEF HKFYKNFSSG LKDVVWNTDA AAEEQKQ
Arabidopsis Description
CIPK9CBL-interacting protein kinase 9 [Source:TAIR;Acc:AT1G01140]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.