Factsheet for VIT_15s0048g02740.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0194g00040.t01	plasma membrane, plasma membrane, vacuole, vacuole
VIT_02s0025g01630.t01
VIT_02s0025g01640.t01
VIT_02s0236g00140.t01
VIT_02s0236g00150.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01140.3	VIT_02s0025g01640.t01	AT1G64480.1	23109687
AT1G01140.3	VIT_02s0025g01630.t01	AT4G01420.1	23109687
AT1G01140.3	VIT_00s0194g00040.t01	AT4G26570.2	23109687
AT1G01140.3	VIT_00s0194g00040.t01	AT4G26570.2	23109687
AT1G01140.3	VIT_00s0194g00040.t01	AT4G26570.2	23109687
AT1G01140.3	VIT_02s0236g00140.t01	AT5G47100.1	23109687
AT1G01140.3	VIT_02s0236g00150.t01	AT5G47100.1	23109687
AT1G01140.3	VIT_00s0194g00040.t01	AT5G55990.1	23109687
AT1G01140.3	VIT_00s0194g00040.t01	AT5G55990.1	23109687
AT1G01140.3	VIT_00s0194g00040.t01	AT5G55990.1	23109687

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P10310_001	Banana	cytosol	80.67	77.88
CDY37992	Canola	cytosol	71.84	75.63
KRH06391	Soybean	cytosol	78.52	75.11
KRH47824	Soybean	cytosol	78.52	75.11
KRH68952	Soybean	cytosol	78.52	74.77
CDX90013	Canola	cytosol	78.52	73.6
CDY15197	Canola	cytosol	78.52	73.6
AT1G01140.3	Thale cress	cytosol	79.0	73.39
PGSC0003DMT400035574	Potato	cytosol, plastid	71.12	73.04
Bra032622.1-P	Field mustard	cytosol	77.33	72.81
CDY32442	Canola	cytosol	77.33	72.81
Solyc05g047600.2.1	Tomato	cytosol	78.04	72.51
Zm00001d027455_P001	Maize	cytosol	76.37	71.91
EER92947	Sorghum	cytosol, plastid	76.13	71.36
TraesCS4B01G319900.1	Wheat	cytosol	73.75	69.75
HORVU4Hr1G083080.1	Barley	cytosol	73.99	69.66
TraesCS4D01G316500.1	Wheat	cytosol	73.75	69.44
TraesCS5A01G492000.1	Wheat	mitochondrion	73.75	69.28
VIT_10s0003g04020.t01	Wine grape	cytosol	74.94	69.01
Zm00001d048460_P001	Maize	cytosol	76.13	68.45
VIT_06s0009g01840.t01	Wine grape	cytosol	71.6	68.34
CDY68292	Canola	nucleus	37.71	68.1
Bra033282.1-P	Field mustard	cytosol	76.61	66.6
Os03t0126800-00	Rice	plasma membrane	72.55	63.6
VIT_11s0016g05420.t01	Wine grape	cytosol	57.52	54.04
VIT_18s0001g07980.t01	Wine grape	cytosol	57.04	53.47
VIT_05s0020g00830.t01	Wine grape	cytosol	46.78	50.13
VIT_11s0052g01700.t01	Wine grape	cytosol	49.16	44.11
KRH45118	Soybean	plasma membrane	43.2	38.76
VIT_14s0108g01230.t01	Wine grape	cytosol	37.23	30.35
VIT_08s0040g00720.t01	Wine grape	cytosol	36.99	28.34

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100254007	wikigene:100254007	MapMan:18.4.5.3	Gene3D:3.30.200.20	Gene3D:3.30.310.80	ProteinID:ACQ83528
ProteinID:ACQ83528.1	UniProt:C4P7W1	ProteinID:CCB61289	ProteinID:CCB61289.1	EntrezGene:CIPK12	wikigene:CIPK12
InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase	EMBL:FJ901240	EMBL:FN596739	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:IPR018451	InterPro:Kinase-like_dom_sf
InterPro:NAF/FISL_domain	InterPro:NAF_dom	RefSeq:NP_001267941.1	PFAM:PF00069	PFAM:PF03822	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR43895	PANTHER:PTHR43895:SF11
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC61968
UniParc:UPI00015CA7E4	ArrayExpress:VIT_15s0048g02740	EnsemblPlantsGene:VIT_15s0048g02740	EnsemblPlants:VIT_15s0048g02740.t01	unigene:Vvi.1965	SEG:seg

Description

Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:C4P7W1]

Coordinates

chr15:-:16877305..16882506

Molecular Weight (calculated)

47273.9 Da

IEP (calculated)

8.442

GRAVY (calculated)

-0.360

Length

419 amino acids

Sequence
(BLAST)

001: MSMKVPATRT RVGRYEIGKT LGEGSFAKVK YARNSDTGDS VAIKVLDRDH VLRHKMVEQI KREISTMKLI KHPNVVTIFE VMASKTKIYI VVEFVDGGEL
101: FDRIAKNGRL KEDEARRYFQ QLINAVDYCH SRGVYHRDLK PENLLLDSYG VLKISDFGLS ALSQQVREDG LFHTACGTPN YVAPEVLNNK GYDGASADIW
201: SCGVILFVLL AGYLPFDEVS LMALYKKICK ADFSCPSWLS PGAKKLINRI LDPNPVTRIT IPEILEDGWF KKGYQPTCFQ QEEDVNVDDV DAAFNNSEEN
301: LVTERKEKPV SMNAFELISR SQSFNLENLF GKQAGLVKRE TSFTSQRPAH EIMSKIEETA KPLGFNVRKQ NYKMKLQGDK TGRKGHLSVA TEVFEVAPSL
401: HMVELRKTGG DTLEFHKAC

Best Arabidopsis Sequence Match ( AT1G01140.3 )
(BLAST)

001: MSGSRRKATP ASRTRVGNYE MGRTLGEGSF AKVKYAKNTV TGDQAAIKIL DREKVFRHKM VEQLKREIST MKLIKHPNVV EIIEVMASKT KIYIVLELVN
101: GGELFDKIAQ QGRLKEDEAR RYFQQLINAV DYCHSRGVYH RDLKPENLIL DANGVLKVSD FGLSAFSRQV REDGLLHTAC GTPNYVAPEV LSDKGYDGAA
201: ADVWSCGVIL FVLMAGYLPF DEPNLMTLYK RICKAEFSCP PWFSQGAKRV IKRILEPNPI TRISIAELLE DEWFKKGYKP PSFDQDDEDI TIDDVDAAFS
301: NSKECLVTEK KEKPVSMNAF ELISSSSEFS LENLFEKQAQ LVKKETRFTS QRSASEIMSK MEETAKPLGF NVRKDNYKIK MKGDKSGRKG QLSVATEVFE
401: VAPSLHVVEL RKTGGDTLEF HKVCDSFYKN FSSGLKDVVW NTDAAAEEQK Q

Arabidopsis Description

CIPK9CBL-interacting protein kinase 9 [Source:TAIR;Acc:AT1G01140]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.