Factsheet for VIT_02s0236g00140.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_04s0008g05770.t01
VIT_05s0020g00830.t01
VIT_06s0004g07830.t01
VIT_06s0004g07870.t01
VIT_10s0003g01420.t01
VIT_10s0003g04020.t01
VIT_11s0016g00200.t01
VIT_11s0016g05420.t01
VIT_11s0052g01700.t01
VIT_18s0001g07980.t01
VIT_19s0014g01890.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47100.1	VIT_10s0003g04020.t01	AT1G30270.1	14730064
AT5G47100.1	VIT_10s0003g04020.t01	AT1G30270.1	16814720
AT5G47100.1	VIT_10s0003g04020.t01	AT1G30270.1	17898163
AT5G47100.1	VIT_05s0020g00830.t01	AT1G48260.1	14730064
AT5G47100.1	VIT_04s0008g05770.t01	AT2G25090.1	14730064
AT5G47100.1	VIT_04s0008g05770.t01	AT2G25090.1	17898163
AT5G47100.1	VIT_06s0004g07870.t01	AT2G30360.1	14730064
AT5G47100.1	VIT_06s0004g07870.t01	AT2G30360.1	21798944
AT5G47100.1	VIT_19s0014g01890.t01	AT3G15090.1	21798944
AT5G47100.1	VIT_05s0020g00830.t01	AT3G17510.1	14730064
AT5G47100.1	VIT_05s0020g00830.t01	AT3G17510.1	17092313
AT5G47100.1	VIT_10s0003g01420.t01	AT4G18700.1	14730064
AT5G47100.1	VIT_18s0001g07980.t01	AT4G24400.1	14730064
AT5G47100.1	VIT_11s0016g00200.t01	AT4G30960.1	17898163
AT5G47100.1	VIT_04s0008g05770.t01	AT5G10930.1	14730064
AT5G47100.1	VIT_11s0016g05420.t01	AT5G35410.1	14730064
AT5G47100.1	VIT_11s0052g01700.t01	AT5G57630.1	14730064
AT5G47100.1	VIT_06s0004g07830.t01	AT5G58380.1	14730064

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0236g00150.t01	Wine grape	cytosol	97.65	93.27
Solyc08g077770.2.1	Tomato	cytosol	88.73	88.73
PGSC0003DMT400011576	Potato	cytosol	88.26	88.26
Bra012655.1-P	Field mustard	cytosol	87.79	87.79
CDX90465	Canola	cytosol	87.79	87.79
GSMUA_AchrUn_...	Banana	cytosol	87.32	87.32
Bra040169.1-P	Field mustard	cytosol	86.39	86.39
CDX78784	Canola	cytosol	86.39	86.39
CDY38412	Canola	cytosol	86.39	86.39
AT5G47100.1	Thale cress	cytosol	85.92	85.92
CDY09616	Canola	cytosol	85.92	85.92
GSMUA_Achr4P30070_001	Banana	cytosol	85.45	85.45
CDY28977	Canola	cytosol	84.98	84.98
Bra022104.1-P	Field mustard	cytosol	84.98	84.98
Os10t0564800-01	Rice	plasma membrane	84.51	84.51
CDY25987	Canola	cytosol	84.04	84.04
CDY40580	Canola	cytosol	84.04	84.04
CDY69850	Canola	cytosol	84.04	84.04
GSMUA_Achr4P26350_001	Banana	cytosol	84.04	84.04
Bra017504.1-P	Field mustard	cytosol	84.04	84.04
EER94470	Sorghum	cytosol	83.1	83.1
Zm00001d029976_P004	Maize	cytosol, mitochondrion	82.63	82.63
TraesCS1A01G215800.1	Wheat	cytosol	83.1	82.33
TraesCS1B01G229300.1	Wheat	cytosol	83.1	82.33
TraesCSU01G178500.1	Wheat	cytosol	83.1	82.33
HORVU1Hr1G055300.1	Barley	cytosol	83.1	82.33
KRH57533	Soybean	mitochondrion	77.93	77.93
TraesCSU01G129500.1	Wheat	cytosol, mitochondrion	78.4	77.31
TraesCS5A01G545500.2	Wheat	cytosol	77.93	77.21
HORVU4Hr1G090270.10	Barley	cytosol	78.4	76.96
TraesCS4B01G379200.1	Wheat	cytosol	71.83	75.37
KRH28207	Soybean	cytosol	74.65	75.0
VIT_00s1569g00020.t01	Wine grape	cytosol	61.5	71.2
KRH04244	Soybean	cytosol	70.89	68.95
AT4G17615.3	Thale cress	cytosol	80.75	68.25
VIT_16s0098g01870.t01	Wine grape	cytosol	66.67	66.67
Zm00001d000046_P001	Maize	cytosol	54.93	66.48
VIT_19s0015g01070.t01	Wine grape	extracellular	63.85	60.18
VIT_02s0025g01640.t01	Wine grape	cytosol	60.09	58.45
VIT_04s0008g00950.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	61.03	50.39
VIT_04s0008g00960.t01	Wine grape	plastid	55.4	47.01
VIT_02s0025g01630.t01	Wine grape	cytosol	53.99	43.73
VIT_00s0194g00040.t01	Wine grape	cytosol	15.02	7.9

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100243294	wikigene:100243294	EntrezGene:100260894	wikigene:100260894	MapMan:35.1
ProteinID:ACQ83555	ProteinID:ACQ83555.1	UniProt:C4P7Y8	ProteinID:CBI23390	ProteinID:CBI23390.3	EntrezGene:CBL01
wikigene:CBL01	ProteinID:CBW30483	ProteinID:CBW30483.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
EMBL:FJ901267	EMBL:FN595257	EMBL:FR669117	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:IPR002048	EntrezGene:LOC100243294	wikigene:LOC100243294	RefSeq:NP_001267901.1	PFAM:PF13499	PRINTS:PR00450
ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR23056	PANTHER:PTHR23056:SF41	SMART:SM00054	SUPFAM:SSF47473
TIGR:TC53214	UniParc:UPI00015CDB79	ArrayExpress:VIT_02s0236g00140	EnsemblPlantsGene:VIT_02s0236g00140	EnsemblPlants:VIT_02s0236g00140.t01	unigene:Vvi.1422
unigene:Vvi.24713	RefSeq:XP_002275887	RefSeq:XP_002275887.2	RefSeq:XP_010662593.1	RefSeq:XP_010662599.1	RefSeq:XP_010662695.1

Description

Calcineurin B-like protein 01 [Source:UniProtKB/TrEMBL;Acc:C4P7Y8]

Coordinates

chr2:+:5573432..5579465

Molecular Weight (calculated)

24474.1 Da

IEP (calculated)

4.427

GRAVY (calculated)

-0.180

Length

213 amino acids

Sequence
(BLAST)

001: MGCFQSTARK QFPGHEDPVI LASQTAFSVS EVEALFELFK SISSSVIDDG LINKEEFQLA LFKNRKKENL FANRIFDLFD VKRKGVIDFG DFVRSLNVFH
101: PNAPQEDKID FSFKLYDLDS TGFIERQEVK QMLIALLCES EMKLADETIE IILDKTFLEA DVNQDGRIDK SEWQNFVSRN PSLLKIMTLP YLRDITTTFP
201: SFVFNSEVDE IAT

Best Arabidopsis Sequence Match ( AT4G17615.4 )
(BLAST)

001: MGCFHSKAAK EFRGHEDPVK LASETAFSVS EVEALFELFK SISSSVVDDG LINKEEFQLA LFKSRKRENI FANRIFDMFD VKRKGVIDFG DFVRSLNVFH
101: PNASLEDKID FTFRLYDMDC TGYIERQEVK QMLIALLCES EMKLADETIE IILDKTFEDA DVNQDGKIDK LEWSDFVNKN PSLLKIMTLP YLRDITTTFP
201: SFVFHSEVDE IAT

Arabidopsis Description

CBL1calcineurin B-like protein 1 [Source:TAIR;Acc:AT4G17615]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.