Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol | 88.73 | 88.73 |
| GSMUA_Achr4P30070_001 | Banana | cytosol | 87.79 | 87.79 |
| VIT_02s0236g00140.t01 | Wine grape | cytosol | 84.04 | 84.04 |
| Bra012655.1-P | Field mustard | cytosol | 79.81 | 79.81 |
| CDX90465 | Canola | cytosol | 79.81 | 79.81 |
| Solyc08g077770.2.1 | Tomato | cytosol | 79.34 | 79.34 |
| Zm00001d029976_P004 | Maize | cytosol, mitochondrion | 78.87 | 78.87 |
| PGSC0003DMT400011576 | Potato | cytosol | 78.87 | 78.87 |
| VIT_02s0236g00150.t01 | Wine grape | cytosol | 82.16 | 78.48 |
| Bra040169.1-P | Field mustard | cytosol | 78.4 | 78.4 |
| CDY38412 | Canola | cytosol | 78.4 | 78.4 |
| EER94470 | Sorghum | cytosol | 78.4 | 78.4 |
| TraesCS1A01G215800.1 | Wheat | cytosol | 78.87 | 78.14 |
| TraesCS1B01G229300.1 | Wheat | cytosol | 78.87 | 78.14 |
| HORVU1Hr1G055300.1 | Barley | cytosol | 78.87 | 78.14 |
| TraesCSU01G178500.1 | Wheat | cytosol | 78.87 | 78.14 |
| CDX78784 | Canola | cytosol | 77.93 | 77.93 |
| Os10t0564800-01 | Rice | plasma membrane | 77.93 | 77.93 |
| CDY09616 | Canola | cytosol | 77.93 | 77.93 |
| AT5G47100.1 | Thale cress | cytosol | 76.53 | 76.53 |
| PGSC0003DMT400068352 | Potato | cytosol | 77.0 | 76.28 |
| Bra022104.1-P | Field mustard | cytosol | 75.59 | 75.59 |
| CDY28977 | Canola | cytosol | 75.59 | 75.59 |
| CDY25987 | Canola | cytosol | 74.65 | 74.65 |
| Bra017504.1-P | Field mustard | cytosol | 74.65 | 74.65 |
| CDY69850 | Canola | cytosol | 74.65 | 74.65 |
| CDY40580 | Canola | cytosol | 74.65 | 74.65 |
| TraesCS5A01G545500.2 | Wheat | cytosol | 75.12 | 74.42 |
| TraesCSU01G129500.1 | Wheat | cytosol, mitochondrion | 75.12 | 74.07 |
| Solyc08g007160.2.1 | Tomato | cytosol | 74.65 | 73.95 |
| HORVU4Hr1G090270.10 | Barley | cytosol | 75.12 | 73.73 |
| TraesCS4B01G379200.1 | Wheat | cytosol | 69.48 | 72.91 |
| KRH57533 | Soybean | mitochondrion | 72.77 | 72.77 |
| Solyc06g060980.1.1 | Tomato | cytosol, mitochondrion | 73.24 | 72.56 |
| KRH28207 | Soybean | cytosol | 68.08 | 68.4 |
| KRH04244 | Soybean | cytosol | 66.2 | 64.38 |
| Zm00001d000046_P001 | Maize | cytosol | 52.58 | 63.64 |
| AT4G17615.3 | Thale cress | cytosol | 72.77 | 61.51 |
| GSMUA_Achr1P13780_001 | Banana | cytosol | 55.4 | 60.51 |
| GSMUA_Achr1P13790_001 | Banana | cytosol | 60.56 | 59.72 |
| GSMUA_Achr3P03340_001 | Banana | cytosol | 57.75 | 58.02 |
| PGSC0003DMT400052805 | Potato | cytosol | 69.48 | 56.7 |
| GSMUA_Achr9P12840_001 | Banana | cytosol | 60.09 | 56.64 |
| GSMUA_Achr4P09270_001 | Banana | cytosol | 59.15 | 55.75 |
| GSMUA_Achr4P08200_001 | Banana | cytosol | 55.87 | 54.34 |
| GSMUA_AchrUn_... | Banana | cytosol | 55.87 | 52.65 |
| GSMUA_Achr3P32370_001 | Banana | cytosol | 51.64 | 41.67 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P26350_001 | EnsemblPlants:GSMUA_Achr4T26350_001 | EnsemblPlantsGene:GSMUA_Achr4G26350_001 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 |
| PANTHER:PTHR23056:SF41 | PFAM:PF13202 | PFscan:PS50222 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI0002959D79 | UniProt:M0SS97 | MapMan:35.1 | : | : | : |
Description
Calcineurin B-like protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G26350_001]
Coordinates
chr4:+:25699322..25708322
Molecular Weight (calculated)
24488.3 Da
IEP (calculated)
4.686
GRAVY (calculated)
-0.250
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCFQSKGRR HFPGYEDPVL LASQTAFTVS EVEALFELFK IISSSVIDDG LINKEEFQLA LSMSRKKENL FANRLFDLFD VKQKRVIDFG DFVRSLNIFH
101: PNAPHEDKVD FSFKLYDLDG TGFIERKEVK QMLLALVSES EMKLADETVE IILDKTFQQA DGNQDGKIDK TEWKNFVSRN PSLMEIMTLP YLRDITTTFP
201: SFIFNSKVDD IAT
101: PNAPHEDKVD FSFKLYDLDG TGFIERKEVK QMLLALVSES EMKLADETVE IILDKTFQQA DGNQDGKIDK TEWKNFVSRN PSLMEIMTLP YLRDITTTFP
201: SFIFNSKVDD IAT
001: MGCFHSKAAK EFRGHEDPVK LASETAFSVS EVEALFELFK SISSSVVDDG LINKEEFQLA LFKSRKRENI FANRIFDMFD VKRKGVIDFG DFVRSLNVFH
101: PNASLEDKID FTFRLYDMDC TGYIERQEVK QMLIALLCES EMKLADETIE IILDKTFEDA DVNQDGKIDK LEWSDFVNKN PSLLKIMTLP YLRDITTTFP
201: SFVFHSEVDE IAT
101: PNASLEDKID FTFRLYDMDC TGYIERQEVK QMLIALLCES EMKLADETIE IILDKTFEDA DVNQDGKIDK LEWSDFVNKN PSLLKIMTLP YLRDITTTFP
201: SFVFHSEVDE IAT
Arabidopsis Description
CBL1calcineurin B-like protein 1 [Source:TAIR;Acc:AT4G17615]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.