Factsheet for Solyc08g077770.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g021440.2.1
Solyc02g072530.1.1
Solyc04g076810.2.1
Solyc05g053210.2.1
Solyc06g007430.1.1
Solyc06g007440.2.1
Solyc06g082440.1.1
Solyc07g005440.1.1
Solyc08g067310.1.1
Solyc12g009570.1.1
Solyc12g010130.1.1
Solyc12g014050.1.1
Solyc12g098910.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47100.1	Solyc02g021440.2.1	AT1G30270.1	14730064
AT5G47100.1	Solyc02g021440.2.1	AT1G30270.1	16814720
AT5G47100.1	Solyc02g021440.2.1	AT1G30270.1	17898163
AT5G47100.1	Solyc05g053210.2.1	AT1G48260.1	14730064
AT5G47100.1	Solyc12g098910.1.1	AT1G48260.1	14730064
AT5G47100.1	Solyc08g067310.1.1	AT2G25090.1	14730064
AT5G47100.1	Solyc08g067310.1.1	AT2G25090.1	17898163
AT5G47100.1	Solyc06g007440.2.1	AT2G30360.1	14730064
AT5G47100.1	Solyc06g082440.1.1	AT2G30360.1	14730064
AT5G47100.1	Solyc06g007440.2.1	AT2G30360.1	21798944
AT5G47100.1	Solyc06g082440.1.1	AT2G30360.1	21798944
AT5G47100.1	Solyc12g014050.1.1	AT3G15090.1	21798944
AT5G47100.1	Solyc05g053210.2.1	AT3G17510.1	14730064
AT5G47100.1	Solyc12g098910.1.1	AT3G17510.1	14730064
AT5G47100.1	Solyc05g053210.2.1	AT3G17510.1	17092313
AT5G47100.1	Solyc12g098910.1.1	AT3G17510.1	17092313
AT5G47100.1	Solyc02g072530.1.1	AT4G18700.1	14730064
AT5G47100.1	Solyc04g076810.2.1	AT4G24400.1	14730064
AT5G47100.1	Solyc07g005440.1.1	AT4G30960.1	17898163
AT5G47100.1	Solyc12g010130.1.1	AT4G30960.1	17898163
AT5G47100.1	Solyc08g067310.1.1	AT5G10930.1	14730064
AT5G47100.1	Solyc12g009570.1.1	AT5G35410.1	14730064
AT5G47100.1	Solyc06g007430.1.1	AT5G58380.1	14730064

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400011576	Potato	cytosol	99.53	99.53
VIT_02s0236g00140.t01	Wine grape	cytosol	88.73	88.73
VIT_02s0236g00150.t01	Wine grape	cytosol	87.32	83.41
Bra012655.1-P	Field mustard	cytosol	83.1	83.1
CDX90465	Canola	cytosol	83.1	83.1
GSMUA_AchrUn_...	Banana	cytosol	83.1	83.1
Bra040169.1-P	Field mustard	cytosol	82.16	82.16
CDY38412	Canola	cytosol	82.16	82.16
CDX78784	Canola	cytosol	81.69	81.69
CDY09616	Canola	cytosol	81.69	81.69
Solyc08g007160.2.1	Tomato	cytosol	82.16	81.4
GSMUA_Achr4P30070_001	Banana	cytosol	81.22	81.22
Solyc06g060980.1.1	Tomato	cytosol, mitochondrion	81.69	80.93
AT5G47100.1	Thale cress	cytosol	80.28	80.28
Zm00001d029976_P004	Maize	cytosol, mitochondrion	79.81	79.81
Bra022104.1-P	Field mustard	cytosol	79.81	79.81
CDY28977	Canola	cytosol	79.81	79.81
EER94470	Sorghum	cytosol	79.34	79.34
GSMUA_Achr4P26350_001	Banana	cytosol	79.34	79.34
CDY40580	Canola	cytosol	79.34	79.34
CDY25987	Canola	cytosol	78.87	78.87
Bra017504.1-P	Field mustard	cytosol	78.87	78.87
CDY69850	Canola	cytosol	78.87	78.87
HORVU1Hr1G055300.1	Barley	cytosol	78.87	78.14
TraesCSU01G178500.1	Wheat	cytosol	78.87	78.14
TraesCS1B01G229300.1	Wheat	cytosol	78.87	78.14
TraesCS1A01G215800.1	Wheat	cytosol	78.87	78.14
Os10t0564800-01	Rice	plasma membrane	77.93	77.93
KRH57533	Soybean	mitochondrion	75.59	75.59
KRH28207	Soybean	cytosol	73.71	74.06
TraesCSU01G129500.1	Wheat	cytosol, mitochondrion	74.65	73.61
TraesCS5A01G545500.2	Wheat	cytosol	73.71	73.02
TraesCS4B01G379200.1	Wheat	cytosol	69.01	72.41
HORVU4Hr1G090270.10	Barley	cytosol	73.71	72.35
KRH04244	Soybean	cytosol	69.48	67.58
AT4G17615.3	Thale cress	cytosol	76.06	64.29
Solyc03g083320.2.1	Tomato	cytosol	63.85	63.55
Zm00001d000046_P001	Maize	cytosol	52.11	63.07
Solyc06g051970.2.1	Tomato	cytosol	61.97	61.68
Solyc07g065820.2.1	Tomato	cytosol	62.91	61.19
Solyc12g015870.1.1	Tomato	cytosol	62.44	59.38
Solyc12g055920.1.1	Tomato	cytosol, mitochondrion	54.93	51.77
Solyc02g032310.1.1	Tomato	cytosol	51.17	49.77
Solyc08g036590.1.1	Tomato	endoplasmic reticulum, extracellular	51.64	48.03
Solyc08g065330.2.1	Tomato	endoplasmic reticulum, extracellular	57.75	47.86
Solyc08g054570.1.1	Tomato	cytosol	40.38	46.24

Protein Annotations

EMBL:AB675687	EMBL:KP183328	EnsemblPlants:Solyc08g077770.2.1	EnsemblPlantsGene:Solyc08g077770.2	Gene3D:1.10.238.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048
PANTHER:PTHR23056	PANTHER:PTHR23056:SF41	PFAM:PF13499	PFscan:PS50222	PRINTS:PR00450	ScanProsite:PS00018
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI00022F88FA	UniProt:G5EM33	MapMan:35.1	:

Description

Calcineurin B-like molecule [Source:UniProtKB/TrEMBL;Acc:G5EM33]

Coordinates

chr8:-:61672680..61679331

Molecular Weight (calculated)

24297.0 Da

IEP (calculated)

4.620

GRAVY (calculated)

-0.184

Length

213 amino acids

Sequence
(BLAST)

001: MGCFNSKVKK QFRGHEDPIA LASQTAFSVS EVEALFELFK SISSSVIDDG LISKEEFQLA LFKNRKKENL FANRIFDLFD VKQKGVIDFG DFVKGLHVFH
101: PNAPQEEKVN FSFKLYDLDG TGFIERQEVK QMLIALLCES EMKLADETIE SILDKTFVEA DSNQDGKIDK SEWQIFVSQN PSLLKIMTLP YLRDITTTFP
201: SFVFHSEVDE VAT

Best Arabidopsis Sequence Match ( AT4G17615.4 )
(BLAST)

001: MGCFHSKAAK EFRGHEDPVK LASETAFSVS EVEALFELFK SISSSVVDDG LINKEEFQLA LFKSRKRENI FANRIFDMFD VKRKGVIDFG DFVRSLNVFH
101: PNASLEDKID FTFRLYDMDC TGYIERQEVK QMLIALLCES EMKLADETIE IILDKTFEDA DVNQDGKIDK LEWSDFVNKN PSLLKIMTLP YLRDITTTFP
201: SFVFHSEVDE IAT

Arabidopsis Description

CBL1calcineurin B-like protein 1 [Source:TAIR;Acc:AT4G17615]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.