Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5A01G545500.2 | Wheat | cytosol | 95.37 | 95.81 |
HORVU4Hr1G090270.10 | Barley | cytosol | 95.83 | 95.39 |
TraesCS4B01G379200.1 | Wheat | cytosol | 86.11 | 91.63 |
TraesCSU01G178500.1 | Wheat | cytosol | 82.41 | 82.79 |
GSMUA_AchrUn_... | Banana | cytosol | 78.7 | 79.81 |
VIT_02s0236g00140.t01 | Wine grape | cytosol | 77.31 | 78.4 |
GSMUA_Achr4P30070_001 | Banana | cytosol | 76.85 | 77.93 |
Bra040169.1-P | Field mustard | cytosol | 74.54 | 75.59 |
CDY38412 | Canola | cytosol | 74.54 | 75.59 |
AT5G47100.1 | Thale cress | cytosol | 74.07 | 75.12 |
GSMUA_Achr4P26350_001 | Banana | cytosol | 74.07 | 75.12 |
CDX90465 | Canola | cytosol | 74.07 | 75.12 |
CDX78784 | Canola | cytosol | 74.07 | 75.12 |
Bra012655.1-P | Field mustard | cytosol | 74.07 | 75.12 |
PGSC0003DMT400068352 | Potato | cytosol | 74.54 | 74.88 |
CDY09616 | Canola | cytosol | 73.61 | 74.65 |
Solyc08g077770.2.1 | Tomato | cytosol | 73.61 | 74.65 |
CDY28977 | Canola | cytosol | 73.15 | 74.18 |
CDY69850 | Canola | cytosol | 73.15 | 74.18 |
CDY25987 | Canola | cytosol | 73.15 | 74.18 |
Bra017504.1-P | Field mustard | cytosol | 73.15 | 74.18 |
Bra022104.1-P | Field mustard | cytosol | 73.15 | 74.18 |
PGSC0003DMT400011576 | Potato | cytosol | 73.15 | 74.18 |
CDY40580 | Canola | cytosol | 72.22 | 73.24 |
VIT_02s0236g00150.t01 | Wine grape | cytosol | 75.46 | 73.09 |
KRH57533 | Soybean | mitochondrion | 70.83 | 71.83 |
Solyc06g060980.1.1 | Tomato | cytosol, mitochondrion | 71.3 | 71.63 |
KRH28207 | Soybean | cytosol | 69.91 | 71.23 |
Solyc08g007160.2.1 | Tomato | cytosol | 68.98 | 69.3 |
KRH04244 | Soybean | cytosol | 65.74 | 64.84 |
AT4G17615.3 | Thale cress | cytosol | 68.98 | 59.13 |
PGSC0003DMT400052805 | Potato | cytosol | 63.89 | 52.87 |
Protein Annotations
EnsemblPlants:TraesCSU01G129500.1 | EnsemblPlantsGene:TraesCSU01G129500 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF41 |
PFAM:PF13499 | PFscan:PS50222 | PRINTS:PR00450 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 |
MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrUn:+:110511685..110515241
Molecular Weight (calculated)
24596.4 Da
IEP (calculated)
4.580
GRAVY (calculated)
-0.146
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCFHSTATA GARRRYPGYD HPMQLASQTA FSVSEVEALF ELFKTISGSV VDDGLISKEE FQLALFKSKM DNIFANRIFD LFDVKKRGVI DFADFVQALN
101: VFHPSVPMEE KIDFSFKLYD MDNTGFIERK EVKQMLIALL SESGMRLSDE TIESILDKTF SDADVNQDGK IDRAEWENFV SRNPSLMKIM TLPYLKDITT
201: TFPSFVFNSK VDDIVT
101: VFHPSVPMEE KIDFSFKLYD MDNTGFIERK EVKQMLIALL SESGMRLSDE TIESILDKTF SDADVNQDGK IDRAEWENFV SRNPSLMKIM TLPYLKDITT
201: TFPSFVFNSK VDDIVT
001: MGCFHSTAAR EFPDHENPVK LASETAFSVS EVEALYELFK SISSSVVDDG LINKEEFQLA LFKNRKKENL FANRIFDLFD VKRKGVIDFG DFVRSLNVFH
101: PNASLEEKTD FTFRLYDMDC TGFIERQEVK QMLIALLCES EMKLADDTIE MILDQTFEDA DVDRDGKIDK TEWSNFVIKN PSLLKIMTLP YLRDITTTFP
201: SFVFNSEVDE IAT
101: PNASLEEKTD FTFRLYDMDC TGFIERQEVK QMLIALLCES EMKLADDTIE MILDQTFEDA DVDRDGKIDK TEWSNFVIKN PSLLKIMTLP YLRDITTTFP
201: SFVFNSEVDE IAT
Arabidopsis Description
CBL9Calcineurin B-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTB8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.