Factsheet for TraesCS3D01G291700.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G405500.1
TraesCS3B01G439200.1
TraesCS3D01G400700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15090.1	TraesCS3A01G405500.1	AT5G49010.1	21798944
AT3G15090.1	TraesCS3B01G439200.1	AT5G49010.1	21798944
AT3G15090.1	TraesCS3D01G400700.1	AT5G49010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G326600.1	Wheat	mitochondrion	98.9	98.9
TraesCS3A01G292000.1	Wheat	mitochondrion	98.35	98.35
HORVU3Hr1G072320.2	Barley	mitochondrion	95.59	95.59
Os01t0753100-01	Rice	mitochondrion	87.88	87.4
Zm00001d043432_P001	Maize	mitochondrion	83.75	83.75
GSMUA_Achr8P27200_001	Banana	mitochondrion	75.48	74.25
KXG33382	Sorghum	plastid	85.67	74.22
VIT_19s0014g01890.t01	Wine grape	mitochondrion	70.8	71.19
GSMUA_Achr3P15520_001	Banana	mitochondrion	71.9	70.92
KRH27297	Soybean	mitochondrion	69.15	68.96
PGSC0003DMT400039777	Potato	mitochondrion	68.87	68.12
AT3G15090.1	Thale cress	mitochondrion	67.22	66.67
Bra027280.1-P	Field mustard	mitochondrion	66.67	66.3
CDX75808	Canola	mitochondrion	62.81	65.14
Bra001583.1-P	Field mustard	mitochondrion	62.53	64.86
CDX82448	Canola	mitochondrion	62.53	64.86
Solyc12g014050.1.1	Tomato	plastid	69.15	63.38
KRH22019	Soybean	mitochondrion	66.67	62.53
CDX98523	Canola	plastid	67.77	38.86
CDX97630	Canola	plastid	67.49	38.7
TraesCS5D01G287700.1	Wheat	golgi	25.9	27.98
TraesCS7D01G143400.1	Wheat	cytosol	23.97	27.97
TraesCS2D01G276900.1	Wheat	plastid	25.62	27.76
TraesCS5D01G524500.1	Wheat	mitochondrion, peroxisome, plastid	25.9	27.65
TraesCS3D01G494500.1	Wheat	cytosol, peroxisome, plastid	23.69	26.14
TraesCS6D01G122800.1	Wheat	plastid	27.27	25.85
TraesCS5D01G287300.2	Wheat	plastid	26.17	25.82
TraesCS2D01G276700.1	Wheat	mitochondrion	23.42	25.68
TraesCS2D01G276600.1	Wheat	cytosol, mitochondrion, plastid	22.59	25.23
TraesCS6D01G358100.1	Wheat	peroxisome	21.76	24.16
TraesCS6D01G229000.1	Wheat	peroxisome	22.59	23.7
TraesCS6D01G358200.1	Wheat	cytosol	20.66	22.94
TraesCS4D01G365600.1	Wheat	plastid	19.83	18.85

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf
PFAM:PF08240	PFAM:PF13602	InterPro:PKS_ER	PANTHER:PTHR43482	PANTHER:PTHR43482:SF1	SMART:SM00829
SUPFAM:SSF50129	SUPFAM:SSF51735	EnsemblPlantsGene:TraesCS3D01G291700	EnsemblPlants:TraesCS3D01G291700.2	TIGR:cd05289	SEG:seg

Description

No Description!

Coordinates

chr3D:+:401870533..401874139

Molecular Weight (calculated)

38682.7 Da

IEP (calculated)

8.892

GRAVY (calculated)

0.028

Length

363 amino acids

Sequence
(BLAST)

001: MWWRAVARAR RRIPGARPVS TAAAGKSGRE VVVPRFGGPE VLQLRQGVPA PDLKPGEVLV RARAVSINPL DLRMRAGYGR CIFEPLLPLI IGRDISGEVA
101: ATGTSVSSFY IGQEVFGALH PTAIRGTCAD YAVLSQDELT SKPSTLTHVE ASAIPFAALT AWRALYGTAG ISKGQRLLVL GGGGAVGLSA VQLAVAAGCS
201: VSATCGAQSI EQVLAAGAEK AIDYATEDTE STVTGKFDAV LDTIGVAETE RIGINLLRRG GHYMTLQGEA ASLADRYGLY VGLPAATATL LKKQMQYRCS
301: HGIEYWWTYM RADPDGLHEI QRLSGAGKLQ IPVEKTFPIS QVREAHEAKE KRLVPGKVVL EFD

Best Arabidopsis Sequence Match ( AT3G15090.1 )
(BLAST)

001: MRVMRSLRGN SGAGLVFRPA RLNSLRSVFT GCRAVILPRF GGPEVFELRE NVPVPNLNPN EVLVKAKAVS VNPLDCRIRA GYGRSVFQPH LPIIVGRDVS
101: GEVAAIGTSV KSLKVGQEVF GALHPTALRG TYTDYGILSE DELTEKPSSI SHVEASAIPF AALTAWRALK SNARITEGQR LLVFGGGGAV GFSAIQLAVA
201: SGCHVTASCV GQTKDRILAA GAEQAVDYTT EDIELAVKGK FDAVLDTIGG PETERIGINF LRKGGNYMTL QGEAASLTDK YGFVVGLPLA TSLLMKKKIQ
301: YQYSHGIDYW WTYMRADPEG LAEIQRLVGA GKLKIPVEKT FPITDVVAAH EAKEKKQIPG KVVLEF

Arabidopsis Description

AT3g15090/K15M2_24 [Source:UniProtKB/TrEMBL;Acc:Q9LK96]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.