Factsheet for HORVU3Hr1G072320.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G090890.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15090.1	HORVU3Hr1G090890.3	AT5G49010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G291700.2	Wheat	mitochondrion	95.59	95.59
TraesCS3B01G326600.1	Wheat	mitochondrion	95.59	95.59
TraesCS3A01G292000.1	Wheat	mitochondrion	95.32	95.32
Os01t0753100-01	Rice	mitochondrion	87.6	87.12
Zm00001d043432_P001	Maize	mitochondrion	84.02	84.02
GSMUA_Achr8P27200_001	Banana	mitochondrion	76.31	75.07
KXG33382	Sorghum	plastid	85.67	74.22
GSMUA_Achr3P15520_001	Banana	mitochondrion	72.18	71.2
VIT_19s0014g01890.t01	Wine grape	mitochondrion	70.8	71.19
KRH27297	Soybean	mitochondrion	69.42	69.23
PGSC0003DMT400039777	Potato	mitochondrion	69.15	68.39
AT3G15090.1	Thale cress	mitochondrion	66.67	66.12
Bra027280.1-P	Field mustard	mitochondrion	66.12	65.75
CDX75808	Canola	mitochondrion	63.09	65.43
Bra001583.1-P	Field mustard	mitochondrion	62.53	64.86
CDX82448	Canola	mitochondrion	62.53	64.86
Solyc12g014050.1.1	Tomato	plastid	69.42	63.64
KRH22019	Soybean	mitochondrion	67.22	63.05
CDX98523	Canola	plastid	67.22	38.55
CDX97630	Canola	plastid	66.94	38.39
HORVU5Hr1G034160.1	Barley	cytosol, plastid	17.63	31.37
HORVU6Hr1G025630.2	Barley	cytosol	21.21	29.5
HORVU5Hr1G075540.2	Barley	peroxisome, plastid	26.45	27.83
HORVU5Hr1G075550.8	Barley	vacuole	25.62	27.68
HORVU2Hr1G042270.1	Barley	cytosol, plastid	11.02	26.67
HORVU2Hr1G068010.1	Barley	mitochondrion, plastid	23.14	25.53
HORVU6Hr1G063770.1	Barley	peroxisome	22.59	23.7
HORVU6Hr1G088160.7	Barley	cytosol, mitochondrion, peroxisome	21.76	22.64
HORVU6Hr1G025730.2	Barley	plastid	25.62	21.99
HORVU2Hr1G067980.1	Barley	extracellular	22.04	21.98
HORVU4Hr1G088610.1	Barley	plastid	20.39	19.63
HORVU2Hr1G076890.1	Barley	cytosol	10.19	17.21
HORVU5Hr1G034150.2	Barley	nucleus	14.88	16.02

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_N	EMBL:AK371035	EMBL:AK373563
UniProt:F2E4G1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:GroES-like_sf	EnsemblPlantsGene:HORVU3Hr1G072320	EnsemblPlants:HORVU3Hr1G072320.2	InterPro:NAD(P)-bd_dom_sf	PFAM:PF08240
PFAM:PF13602	InterPro:PKS_ER	PANTHER:PTHR43482	PANTHER:PTHR43482:SF1	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI0002007BEF	SEG:seg	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E4G1]

Coordinates

chrchr3H:-:544738474..544742467

Molecular Weight (calculated)

38608.5 Da

IEP (calculated)

8.852

GRAVY (calculated)

0.011

Length

363 amino acids

Sequence
(BLAST)

001: MWWRAVARAR RRIPGPRPVS TAAAAKSGRE VVVPRFGGPE VLEVRQGVPA PDLRPGEVLV RARAVSINPL DLRMRAGYGR SIFEPLLPLI IGRDISGEVA
101: ATGTSVSSFS IGQEVFGALH PTAIRGTCAD YAVLSQDELT SKPSTLTHVE ASAIPFAALT AWRALHGTAG ISEGQRVLVL GGGGAVGLSA VQLAVAAGCS
201: VSATCGSQSI EQVLAAGAEK AIDYATEDTE STVTGKFDAV LDTIGIAETE RTGINLLRRG GHYMTLQGEA ASLADRYGLY VGLPAATATL LKKQMQYRCS
301: HGIEYWWTYM RADPDGLHEI RRLSGAGKLQ IPVEKTFPIS QVKEAHLAKE KRLVPGKVVL EFD

Best Arabidopsis Sequence Match ( AT3G15090.1 )
(BLAST)

001: MRVMRSLRGN SGAGLVFRPA RLNSLRSVFT GCRAVILPRF GGPEVFELRE NVPVPNLNPN EVLVKAKAVS VNPLDCRIRA GYGRSVFQPH LPIIVGRDVS
101: GEVAAIGTSV KSLKVGQEVF GALHPTALRG TYTDYGILSE DELTEKPSSI SHVEASAIPF AALTAWRALK SNARITEGQR LLVFGGGGAV GFSAIQLAVA
201: SGCHVTASCV GQTKDRILAA GAEQAVDYTT EDIELAVKGK FDAVLDTIGG PETERIGINF LRKGGNYMTL QGEAASLTDK YGFVVGLPLA TSLLMKKKIQ
301: YQYSHGIDYW WTYMRADPEG LAEIQRLVGA GKLKIPVEKT FPITDVVAAH EAKEKKQIPG KVVLEF

Arabidopsis Description

AT3g15090/K15M2_24 [Source:UniProtKB/TrEMBL;Acc:Q9LK96]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.