Factsheet for HORVU6Hr1G088160.7

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, peroxisome, mitochondrion

Predictor Summary:

mitochondrion 2
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G358200.1	Wheat	cytosol	88.54	94.5
TraesCS6B01G411700.1	Wheat	cytosol	87.39	93.27
TraesCS6A01G374000.1	Wheat	cytosol	81.95	88.54
Os02t0805600-01	Rice	plasma membrane	79.66	84.76
OQU85913	Sorghum	cytosol	76.79	81.71
Zm00001d018418_P002	Maize	cytosol	76.5	78.53
Zm00001d051987_P001	Maize	cytosol	68.19	77.78
GSMUA_Achr4P15790_001	Banana	cytosol	69.63	74.77
PGSC0003DMT400057744	Potato	cytosol	68.19	73.23
Solyc02g078940.2.1	Tomato	extracellular	67.91	72.92
KRH10765	Soybean	cytosol, peroxisome, plastid	65.62	70.46
CDX82839	Canola	cytosol	63.61	68.31
Bra013540.1-P	Field mustard	cytosol	63.04	67.69
AT4G21580.1	Thale cress	cytosol	62.46	67.08
CDX79076	Canola	cytosol, peroxisome, plastid	36.68	63.68
VIT_09s0002g07820.t01	Wine grape	cytosol	20.06	60.87
HORVU5Hr1G034160.1	Barley	cytosol, plastid	18.34	31.37
HORVU2Hr1G042270.1	Barley	cytosol, plastid	13.18	30.67
HORVU4Hr1G088610.1	Barley	plastid	31.23	28.91
HORVU5Hr1G075550.8	Barley	vacuole	27.79	28.87
HORVU2Hr1G068010.1	Barley	mitochondrion, plastid	26.93	28.57
HORVU5Hr1G075540.2	Barley	peroxisome, plastid	26.93	27.25
HORVU6Hr1G025630.2	Barley	cytosol	20.06	26.82
HORVU2Hr1G067980.1	Barley	extracellular	26.07	25.0
HORVU6Hr1G063770.1	Barley	peroxisome	24.64	24.86
HORVU3Hr1G072320.2	Barley	mitochondrion	22.64	21.76
HORVU6Hr1G025730.2	Barley	plastid	26.07	21.51
HORVU2Hr1G076890.1	Barley	cytosol	11.17	18.14
HORVU5Hr1G034150.2	Barley	nucleus	15.47	16.02

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	UniProt:A0A287V347	InterPro:ADH_C	InterPro:ADH_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf
EnsemblPlantsGene:HORVU6Hr1G088160	EnsemblPlants:HORVU6Hr1G088160.7	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER
PANTHER:PTHR43006	PANTHER:PTHR43006:SF7	InterPro:Quinone_OxRdtase_PIG3	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
TIGRFAMs:TIGR02824	UniParc:UPI000B47ED82	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:565768028..565793290

Molecular Weight (calculated)

36560.3 Da

IEP (calculated)

6.517

GRAVY (calculated)

0.155

Length

349 amino acids

Sequence
(BLAST)

001: IGVYVESKRG RAERRGRSTP TTMRAVAIAS PGGPEVLEER EVEDLPAPGD GEVLLRVAAA GVNRTDTVQR QGGYPLPPGA SPYPGVECSG TILALGANVH
101: PRWVVGDQVC ALLPGGGYAE KVVVPAALLL PVPEEVSLTD AAGLPEVACT VWSTVFMTSH LSPGESFLIH GGSSGIGTFA IQMAKHLGIK VIVTAGSEEK
201: LAACAGLGAD VCINYKTEDF VARIKEETNG NGVDVILDNV GGPYLQRNLE SLAVDGRLFI IGFMGGTVTE LNLQAMLARR LTIQVAGLRS RSLANKAQIV
301: SAVEKNVWPA VASGKVRPVV YKTLSLSEAA EAHKLMESSS HIGKILLIP

Best Arabidopsis Sequence Match ( AT4G21580.1 )
(BLAST)

001: MKAIVISEPG KPEVLQLRDV ADPEVKDDEV LIRVLATALN RADTLQRLGL YNPPPGSSPY LGLECSGTIE SVGKGVSRWK VGDQVCALLS GGGYAEKVSV
101: PAGQIFPIPA GISLKDAAAF PEVACTVWST VFMMGRLSVG ESFLIHGGSS GIGTFAIQIA KHLGVRVFVT AGSDEKLAAC KELGADVCIN YKTEDFVAKV
201: KAETDGKGVD VILDCIGAPY LQKNLDSLNF DGRLCIIGLM GGANAEIKLS SLLPKRLTVL GAALRPRSPE NKAVVVREVE KNVWPAIEAG KVKPVIYKYL
301: PLSQAAEGHS LMESSNHIGK ILLET

Arabidopsis Description

AT4g21580/F18E5_200 [Source:UniProtKB/TrEMBL;Acc:O65423]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.