Factsheet for Bra013540.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82839	Canola	cytosol	97.54	97.54
AT4G21580.1	Thale cress	cytosol	90.77	90.77
CDX79076	Canola	cytosol, peroxisome, plastid	55.69	90.05
KRH10765	Soybean	cytosol, peroxisome, plastid	76.31	76.31
GSMUA_Achr4P15790_001	Banana	cytosol	74.77	74.77
PGSC0003DMT400057744	Potato	cytosol	74.15	74.15
VIT_00s0301g00170.t01	Wine grape	cytosol	72.31	73.67
Solyc02g078940.2.1	Tomato	extracellular	73.54	73.54
VIT_00s0301g00180.t01	Wine grape	cytosol	73.23	73.23
TraesCS6D01G358100.1	Wheat	peroxisome	70.46	70.03
TraesCS6B01G411600.1	Wheat	peroxisome	70.46	70.03
TraesCS6A01G373900.1	Wheat	golgi	70.15	69.72
OQU85913	Sorghum	cytosol	69.54	68.9
Os02t0805600-01	Rice	plasma membrane	69.54	68.9
TraesCS6D01G358200.1	Wheat	cytosol	68.31	67.89
TraesCS6B01G411700.1	Wheat	cytosol	66.46	66.06
Zm00001d051987_P001	Maize	cytosol	62.15	66.01
Zm00001d018418_P002	Maize	cytosol	68.62	65.59
TraesCS6A01G374000.1	Wheat	cytosol	62.77	63.16
HORVU6Hr1G088160.7	Barley	cytosol, mitochondrion, peroxisome	67.69	63.04
VIT_14s0036g00560.t01	Wine grape	cytosol	26.77	54.72
VIT_09s0002g07690.t01	Wine grape	cytosol	30.15	54.14
VIT_09s0002g07840.t01	Wine grape	cytosol	44.62	50.17
VIT_09s0002g07580.t01	Wine grape	peroxisome	45.54	47.44
VIT_09s0002g07620.t01	Wine grape	cytosol	42.46	46.78
VIT_09s0070g00550.t01	Wine grape	cytosol	20.62	42.68
VIT_09s0002g07760.t01	Wine grape	cytosol	31.38	39.38
Bra035926.1-P	Field mustard	cytosol	30.77	30.86
Bra001207.1-P	Field mustard	cytosol	28.92	28.57
Bra024616.1-P	Field mustard	plastid	29.85	25.19
Bra027280.1-P	Field mustard	mitochondrion	23.69	21.1
Bra001583.1-P	Field mustard	mitochondrion	22.15	20.57
Bra003241.1-P	Field mustard	cytosol	25.23	17.56

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	InterPro:ADH_N	EnsemblPlantsGene:Bra013540
EnsemblPlants:Bra013540.1	EnsemblPlants:Bra013540.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:GroES-like_sf	UniProt:M4DAN0	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	PANTHER:PTHR43006	PANTHER:PTHR43006:SF7	InterPro:Quinone_OxRdtase_PIG3	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	TIGRFAMs:TIGR02824	UniParc:UPI0002546FA5	SEG:seg	:	:

Description

AT4G21580 (E=1e-144) | oxidoreductase, zinc-binding dehydrogenase family protein

Coordinates

chrA01:+:6197263..6198753

Molecular Weight (calculated)

34402.9 Da

IEP (calculated)

6.664

GRAVY (calculated)

0.171

Length

325 amino acids

Sequence
(BLAST)

001: MKAIVISEPG APEVLQLREV EDPQVKDDEV LIRVHATALN RADTLQRLGS YSPPPGSSPY PGLECSGTVE SVGSSVSRWK VGDQVCALLS GGGYAEKVAV
101: PVGQVLPIPA GISLKDAAAF PEVACTVWST VFMMGRLSPA ESFLVHGGSS GIGTFAIQMA KHQGVRVFVT AGNEEKLAAC KELGADVCIN YKTEDFVARV
201: KAETDGKGVD VILDCIGAPY LQKNLDILNF DGRLCIIGLM GGANAEIKLS SLLPKRLTVL GAALRPRSKE NKAVVVAEVE KIVWPAIEAG KVKPVIYKYL
301: PLSQAAEAHS LMESSSHIGK ILLVT

Best Arabidopsis Sequence Match ( AT4G21580.1 )
(BLAST)

001: MKAIVISEPG KPEVLQLRDV ADPEVKDDEV LIRVLATALN RADTLQRLGL YNPPPGSSPY LGLECSGTIE SVGKGVSRWK VGDQVCALLS GGGYAEKVSV
101: PAGQIFPIPA GISLKDAAAF PEVACTVWST VFMMGRLSVG ESFLIHGGSS GIGTFAIQIA KHLGVRVFVT AGSDEKLAAC KELGADVCIN YKTEDFVAKV
201: KAETDGKGVD VILDCIGAPY LQKNLDSLNF DGRLCIIGLM GGANAEIKLS SLLPKRLTVL GAALRPRSPE NKAVVVREVE KNVWPAIEAG KVKPVIYKYL
301: PLSQAAEGHS LMESSNHIGK ILLET

Arabidopsis Description

AT4g21580/F18E5_200 [Source:UniProtKB/TrEMBL;Acc:O65423]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.