Factsheet for VIT_09s0002g07840.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g07690.t01	Wine grape	cytosol	53.29	85.08
VIT_09s0002g07620.t01	Wine grape	cytosol	76.82	75.25
VIT_09s0002g07760.t01	Wine grape	cytosol	61.94	69.11
VIT_09s0002g07580.t01	Wine grape	peroxisome	74.39	68.91
VIT_09s0070g00550.t01	Wine grape	cytosol	34.6	63.69
VIT_00s0301g00170.t01	Wine grape	cytosol	64.36	58.31
VIT_00s0301g00180.t01	Wine grape	cytosol	65.05	57.85
VIT_14s0036g00560.t01	Wine grape	cytosol	27.34	49.69
CDX79076	Canola	cytosol, peroxisome, plastid	33.91	48.76
PGSC0003DMT400057744	Potato	cytosol	54.33	48.31
GSMUA_Achr4P15790_001	Banana	cytosol	53.98	48.0
KRH10765	Soybean	cytosol, peroxisome, plastid	53.98	48.0
Solyc02g078940.2.1	Tomato	extracellular	53.98	48.0
Bra013540.1-P	Field mustard	cytosol	50.17	44.62
CDX82839	Canola	cytosol	50.17	44.62
AT4G21580.1	Thale cress	cytosol	49.83	44.31
VIT_09s0002g07820.t01	Wine grape	cytosol	16.95	42.61
VIT_09s0002g08480.t01	Wine grape	cytosol	21.11	18.43
VIT_09s0002g08470.t01	Wine grape	cytosol	21.11	18.32
VIT_13s0067g00160.t01	Wine grape	peroxisome	18.34	15.36
VIT_07s0151g00260.t01	Wine grape	cytosol	17.65	15.09
VIT_19s0014g01890.t01	Wine grape	mitochondrion	18.69	14.96
VIT_01s0127g00740.t01	Wine grape	plastid	19.03	14.59
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	11.76	13.71
VIT_15s0048g01710.t01	Wine grape	cytosol, peroxisome, plastid	15.57	13.68
VIT_07s0151g00090.t01	Wine grape	mitochondrion	17.99	13.58

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.2	ProteinID:CCB59658	ProteinID:CCB59658.1	UniProt:F6HXI8
EMBL:FN596494	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	InterPro:PKS_ER	PANTHER:PTHR43006	PANTHER:PTHR43006:SF7
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000210A79C	ArrayExpress:VIT_09s0002g07840	EnsemblPlantsGene:VIT_09s0002g07840
EnsemblPlants:VIT_09s0002g07840.t01	:	:	:	:	:

Description

No Description!

Coordinates

chr9:+:8294947..8298016

Molecular Weight (calculated)

30688.0 Da

IEP (calculated)

7.506

GRAVY (calculated)

0.110

Length

289 amino acids

Sequence
(BLAST)

001: MKAVVIATSG DPQVLQVQEV ENPEIGDDEV LSRVDAAAIN RTDTLQRKGL HPSSKAAVPT RVSNVLESSK LLEKPSFDGR LAIRKIDQCK VCALLSGGGH
101: AEKVAVPAGQ VLPVLSGVSL KDAAGIPEVA CTVWSTVLMM SRLSAGETFL VHGGSIGIGT IYSNSEILRS KGKGVDVILD NIGGAYFWGD INGLNVDGRL
201: FIIGFQGGTV VQVNLSGLLA RRLTVQVAGL QNRSLEKKSV IVSEVEKNVW PTITGVQVFS IDGSSRGSPA HGKQQAYWED TAYSIILWL

Best Arabidopsis Sequence Match ( AT4G21580.3 )
(BLAST)

001: MKAIVISEPG KPEVLQLRDV ADPEVKDDEV LIRVLATALN RADTLQRLGL YNPPPGSSPY LGLECSGTIE SVGKGVSRWK VGDQVCALLS GGGYAEKVSV
101: PAGQIFPIPA GISLKDAAAF PEVACTVWST VFMMGRLSVG ESFLIHGGSS GIGTFAIQIA KHLGVRVFVT AAACKELGAD VCINYKTEDF VAKVKAETDG
201: KGVDVILDCI GAPYLQKNLD SLNFDGRLCI IGLMGGANAE IKLSSLLPKR LTVLGAALRP RSPENKAVVV REVEKNVWPA IEAGKVKPVI YKYLPLSQAA
301: EGHSLMESSN HIGKILLET

Arabidopsis Description

AT4g21580/F18E5_200 [Source:UniProtKB/TrEMBL;Acc:O65423]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.