Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013540.1-P | Field mustard | cytosol | 90.77 | 90.77 |
| CDX82839 | Canola | cytosol | 90.15 | 90.15 |
| CDX79076 | Canola | cytosol, peroxisome, plastid | 50.77 | 82.09 |
| VIT_00s0301g00170.t01 | Wine grape | cytosol | 73.85 | 75.24 |
| KRH10765 | Soybean | cytosol, peroxisome, plastid | 74.46 | 74.46 |
| PGSC0003DMT400057744 | Potato | cytosol | 72.92 | 72.92 |
| Solyc02g078940.2.1 | Tomato | extracellular | 72.92 | 72.92 |
| VIT_00s0301g00180.t01 | Wine grape | cytosol | 72.62 | 72.62 |
| GSMUA_Achr4P15790_001 | Banana | cytosol | 72.31 | 72.31 |
| TraesCS6B01G411600.1 | Wheat | peroxisome | 71.08 | 70.64 |
| TraesCS6D01G358100.1 | Wheat | peroxisome | 70.77 | 70.34 |
| TraesCS6A01G373900.1 | Wheat | golgi | 70.77 | 70.34 |
| OQU85913 | Sorghum | cytosol | 69.85 | 69.21 |
| Os02t0805600-01 | Rice | plasma membrane | 69.85 | 69.21 |
| TraesCS6D01G358200.1 | Wheat | cytosol | 68.31 | 67.89 |
| TraesCS6B01G411700.1 | Wheat | cytosol | 66.77 | 66.36 |
| Zm00001d051987_P001 | Maize | cytosol | 62.15 | 66.01 |
| Zm00001d018418_P002 | Maize | cytosol | 68.92 | 65.88 |
| TraesCS6A01G374000.1 | Wheat | cytosol | 62.77 | 63.16 |
| HORVU6Hr1G088160.7 | Barley | cytosol, mitochondrion, peroxisome | 67.08 | 62.46 |
| VIT_14s0036g00560.t01 | Wine grape | cytosol | 27.08 | 55.35 |
| VIT_09s0002g07690.t01 | Wine grape | cytosol | 29.85 | 53.59 |
| VIT_09s0002g07840.t01 | Wine grape | cytosol | 44.31 | 49.83 |
| VIT_09s0002g07580.t01 | Wine grape | peroxisome | 44.62 | 46.47 |
| VIT_09s0002g07620.t01 | Wine grape | cytosol | 42.15 | 46.44 |
| VIT_09s0002g07760.t01 | Wine grape | cytosol | 31.08 | 39.0 |
| VIT_09s0070g00550.t01 | Wine grape | cytosol | 18.46 | 38.22 |
| AT4G13010.1 | Thale cress | cytosol | 28.0 | 27.66 |
| AT3G56460.1 | Thale cress | cytosol | 25.54 | 23.85 |
| AT1G23740.1 | Thale cress | plastid | 28.31 | 23.83 |
| AT5G61510.1 | Thale cress | plastid | 29.23 | 23.4 |
| AT3G15090.1 | Thale cress | mitochondrion | 22.77 | 20.22 |
Protein Annotations
| Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | MapMan:50.1.3 | EntrezGene:828243 | UniProt:A0A178V300 | InterPro:ADH_C |
| InterPro:ADH_N | ProteinID:AEE84473.1 | EMBL:AF411784 | ArrayExpress:AT4G21580 | EnsemblPlantsGene:AT4G21580 | RefSeq:AT4G21580 |
| TAIR:AT4G21580 | RefSeq:AT4G21580-TAIR-G | EnsemblPlants:AT4G21580.1 | TAIR:AT4G21580.1 | EMBL:AY088237 | EMBL:AY124814 |
| Unigene:At.2271 | ProteinID:CAA18722.1 | ProteinID:CAB36802.1 | ProteinID:CAB81265.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0016491 | GO:GO:0055114 | InterPro:GroES-like_sf |
| InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_193889.1 | UniProt:O65423 | ProteinID:OAP00619.1 | PFAM:PF00107 | PFAM:PF08240 |
| InterPro:PKS_ER | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR43006 | PANTHER:PTHR43006:SF7 | InterPro:Quinone_OxRdtase_PIG3 | SMART:SM00829 |
| SUPFAM:SSF50129 | SUPFAM:SSF51735 | TIGRFAMs:TIGR02824 | UniParc:UPI000009F5A5 | : | : |
Description
AT4g21580/F18E5_200 [Source:UniProtKB/TrEMBL;Acc:O65423]
Coordinates
chr4:+:11475709..11477837
Molecular Weight (calculated)
34467.0 Da
IEP (calculated)
6.896
GRAVY (calculated)
0.150
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MKAIVISEPG KPEVLQLRDV ADPEVKDDEV LIRVLATALN RADTLQRLGL YNPPPGSSPY LGLECSGTIE SVGKGVSRWK VGDQVCALLS GGGYAEKVSV
101: PAGQIFPIPA GISLKDAAAF PEVACTVWST VFMMGRLSVG ESFLIHGGSS GIGTFAIQIA KHLGVRVFVT AGSDEKLAAC KELGADVCIN YKTEDFVAKV
201: KAETDGKGVD VILDCIGAPY LQKNLDSLNF DGRLCIIGLM GGANAEIKLS SLLPKRLTVL GAALRPRSPE NKAVVVREVE KNVWPAIEAG KVKPVIYKYL
301: PLSQAAEGHS LMESSNHIGK ILLET
101: PAGQIFPIPA GISLKDAAAF PEVACTVWST VFMMGRLSVG ESFLIHGGSS GIGTFAIQIA KHLGVRVFVT AGSDEKLAAC KELGADVCIN YKTEDFVAKV
201: KAETDGKGVD VILDCIGAPY LQKNLDSLNF DGRLCIIGLM GGANAEIKLS SLLPKRLTVL GAALRPRSPE NKAVVVREVE KNVWPAIEAG KVKPVIYKYL
301: PLSQAAEGHS LMESSNHIGK ILLET
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.