Factsheet for VIT_09s0002g07620.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g07840.t01	Wine grape	cytosol	75.25	76.82
VIT_09s0002g07690.t01	Wine grape	cytosol	46.78	76.24
VIT_09s0070g00550.t01	Wine grape	cytosol	37.29	70.06
VIT_09s0002g07760.t01	Wine grape	cytosol	54.24	61.78
VIT_09s0002g07580.t01	Wine grape	peroxisome	64.07	60.58
VIT_00s0301g00170.t01	Wine grape	cytosol	59.32	54.86
VIT_00s0301g00180.t01	Wine grape	cytosol	60.0	54.46
CDX79076	Canola	cytosol, peroxisome, plastid	35.59	52.24
VIT_14s0036g00560.t01	Wine grape	cytosol	26.44	49.06
GSMUA_Achr4P15790_001	Banana	cytosol	50.51	45.85
KRH10765	Soybean	cytosol, peroxisome, plastid	50.17	45.54
PGSC0003DMT400057744	Potato	cytosol	48.81	44.31
Solyc02g078940.2.1	Tomato	extracellular	48.47	44.0
Bra013540.1-P	Field mustard	cytosol	46.78	42.46
CDX82839	Canola	cytosol	46.78	42.46
AT4G21580.1	Thale cress	cytosol	46.44	42.15
VIT_09s0002g07820.t01	Wine grape	cytosol	9.49	24.35
VIT_09s0002g08480.t01	Wine grape	cytosol	18.64	16.62
VIT_09s0002g08470.t01	Wine grape	cytosol	18.64	16.52
VIT_01s0127g00740.t01	Wine grape	plastid	18.98	14.85
VIT_07s0151g00260.t01	Wine grape	cytosol	16.95	14.79
VIT_19s0014g01890.t01	Wine grape	mitochondrion	17.29	14.13
VIT_13s0067g00160.t01	Wine grape	peroxisome	16.27	13.91
VIT_15s0048g01710.t01	Wine grape	cytosol, peroxisome, plastid	14.92	13.37
VIT_07s0151g00090.t01	Wine grape	mitochondrion	17.29	13.32
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	11.19	13.31

Protein Annotations

ArrayExpress:VIT_09s0002g07620	EMBL:FN596494	EnsemblPlants:VIT_09s0002g07620.t01	EnsemblPlantsGene:VIT_09s0002g07620	Gene3D:3.40.50.720	Gene3D:3.90.180.10
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:GroES-like_sf	InterPro:PKS_ER	PANTHER:PTHR43006	PANTHER:PTHR43006:SF7	ProteinID:CCB59643	ProteinID:CCB59643.1
SMART:SM00829	SUPFAM:SSF50129	UniParc:UPI000210A78E	UniProt:F6HXH3	MapMan:35.2	:

Description

No Description!

Coordinates

chr9:+:7797757..7800986

Molecular Weight (calculated)

31568.5 Da

IEP (calculated)

8.366

GRAVY (calculated)

0.163

Length

295 amino acids

Sequence
(BLAST)

001: MKAVVITTSG DPQVLQVQEV ENPEIGDDEV LIRVDAAAIN RADTLQRKGL HPSSKAAVPT RVSNVLESSK LLEKPSFDGR LAIRRESTDF NAILYVILLP
101: PEYKFIIYMV CALLSGGGYA EKVAVPAGQV LLVPSGVSLK DAAGIPEVAC PVWSTVLMMS CLSAGETFQV HGGSIGIGTF AIQIAKYRGA RMCASITRLK
201: TLLLGWRKQE GKGGTVAEVN LSGLLARCLT VQAAGLRNRS LENKAVIVSE AEKNVWPAIT GVQVFSIDGS SRGSPAHGKQ QACWEDTVHS IMLWL

Best Arabidopsis Sequence Match ( AT4G21580.3 )
(BLAST)

001: MKAIVISEPG KPEVLQLRDV ADPEVKDDEV LIRVLATALN RADTLQRLGL YNPPPGSSPY LGLECSGTIE SVGKGVSRWK VGDQVCALLS GGGYAEKVSV
101: PAGQIFPIPA GISLKDAAAF PEVACTVWST VFMMGRLSVG ESFLIHGGSS GIGTFAIQIA KHLGVRVFVT AAACKELGAD VCINYKTEDF VAKVKAETDG
201: KGVDVILDCI GAPYLQKNLD SLNFDGRLCI IGLMGGANAE IKLSSLLPKR LTVLGAALRP RSPENKAVVV REVEKNVWPA IEAGKVKPVI YKYLPLSQAA
301: EGHSLMESSN HIGKILLET

Arabidopsis Description

AT4g21580/F18E5_200 [Source:UniProtKB/TrEMBL;Acc:O65423]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.