Factsheet for VIT_00s0301g00170.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0301g00180.t01	Wine grape	cytosol	92.16	90.46
VIT_09s0002g07820.t01	Wine grape	cytosol	28.53	79.13
Solyc02g078940.2.1	Tomato	extracellular	79.94	78.46
PGSC0003DMT400057744	Potato	cytosol	79.62	78.15
GSMUA_Achr4P15790_001	Banana	cytosol	78.68	77.23
KRH10765	Soybean	cytosol, peroxisome, plastid	77.74	76.31
AT4G21580.1	Thale cress	cytosol	75.24	73.85
CDX82839	Canola	cytosol	74.29	72.92
Bra013540.1-P	Field mustard	cytosol	73.67	72.31
CDX79076	Canola	cytosol, peroxisome, plastid	42.95	68.16
VIT_09s0002g07690.t01	Wine grape	cytosol	37.62	66.3
VIT_09s0002g07840.t01	Wine grape	cytosol	58.31	64.36
VIT_14s0036g00560.t01	Wine grape	cytosol	31.97	64.15
VIT_09s0002g07580.t01	Wine grape	peroxisome	58.62	59.94
VIT_09s0002g07620.t01	Wine grape	cytosol	54.86	59.32
VIT_09s0002g07760.t01	Wine grape	cytosol	42.01	51.74
VIT_09s0070g00550.t01	Wine grape	cytosol	23.82	48.41
VIT_09s0002g08470.t01	Wine grape	cytosol	30.72	29.43
VIT_09s0002g08480.t01	Wine grape	cytosol	30.09	29.0
VIT_13s0067g00160.t01	Wine grape	peroxisome	26.96	24.93
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	19.12	24.6
VIT_07s0151g00260.t01	Wine grape	cytosol	26.02	24.56
VIT_15s0048g01710.t01	Wine grape	cytosol, peroxisome, plastid	23.82	23.1
VIT_01s0127g00740.t01	Wine grape	plastid	27.27	23.08
VIT_07s0151g00090.t01	Wine grape	mitochondrion	27.27	22.72
VIT_19s0014g01890.t01	Wine grape	mitochondrion	25.39	22.44

Protein Annotations

EntrezGene:100257380	wikigene:100257380	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C
InterPro:ADH_N	EMBL:AM446658	EMBL:AM472586	ProteinID:CAN76421	ProteinID:CAN76421.1	ProteinID:CAN83618
ProteinID:CAN83618.1	ProteinID:CBI18604	ProteinID:CBI18604.3	UniProt:D7SSH1	EMBL:FN594977	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf
EntrezGene:LOC100257380	wikigene:LOC100257380	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER
PANTHER:PTHR43006	PANTHER:PTHR43006:SF7	InterPro:Quinone_OxRdtase_PIG3	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
TIGRFAMs:TIGR02824	UniParc:UPI0001BE140F	ArrayExpress:VIT_00s0301g00170	EnsemblPlantsGene:VIT_00s0301g00170	EnsemblPlants:VIT_00s0301g00170.t01	RefSeq:XP_002267967
RefSeq:XP_002267967.2	RefSeq:XP_003635210	RefSeq:XP_003635210.1	:	:	:

Description

No Description!

Coordinates

chrUn:+:22227204..22230598

Molecular Weight (calculated)

33734.9 Da

IEP (calculated)

6.915

GRAVY (calculated)

0.172

Length

319 amino acids

Sequence
(BLAST)

001: MKAVVITTPG DPQVLQVQEV ENPEIGDNEV LIRVEASALN RADTLQRKGL HPPPKGSSPY PGLECSGIIE AVGKAVVRWK VGDQVCALLA GGGYAEKVSV
101: PAGQVLPVPS GVSLKDAAAI PEVACTVWST VFMMSRLTAG ETFLIHGGSS GIGTFAIQIA KYIGARVFVT ASVCKDLGAD VCINYKTEDF VARVKEETGG
201: KGVDVILDNI GGAYFQRNID SLNVDGRLFI IGFQGGTVAE VNLSGLLARR LTVQAAGLRN RSLENKAAIV SEVEKNVWPA IAAGKVKPVV YKYFPLTEAA
301: EAHQLMESSN HVGKILLIP

Best Arabidopsis Sequence Match ( AT4G21580.3 )
(BLAST)

001: MKAIVISEPG KPEVLQLRDV ADPEVKDDEV LIRVLATALN RADTLQRLGL YNPPPGSSPY LGLECSGTIE SVGKGVSRWK VGDQVCALLS GGGYAEKVSV
101: PAGQIFPIPA GISLKDAAAF PEVACTVWST VFMMGRLSVG ESFLIHGGSS GIGTFAIQIA KHLGVRVFVT AAACKELGAD VCINYKTEDF VAKVKAETDG
201: KGVDVILDCI GAPYLQKNLD SLNFDGRLCI IGLMGGANAE IKLSSLLPKR LTVLGAALRP RSPENKAVVV REVEKNVWPA IEAGKVKPVI YKYLPLSQAA
301: EGHSLMESSN HIGKILLET

Arabidopsis Description

AT4g21580/F18E5_200 [Source:UniProtKB/TrEMBL;Acc:O65423]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.