Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- plastid 3
- peroxisome 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_01s0011g06410.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G56460.1 | VIT_01s0011g06410.t01 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH64241 | Soybean | nucleus | 79.71 | 79.48 |
| KRH53690 | Soybean | cytosol, peroxisome, plasma membrane | 79.13 | 78.67 |
| CDX67648 | Canola | extracellular | 51.01 | 78.57 |
| AT3G56460.1 | Thale cress | cytosol | 77.68 | 77.01 |
| Solyc03g095360.2.1 | Tomato | plastid | 76.52 | 75.86 |
| CDY32016 | Canola | peroxisome | 75.65 | 75.0 |
| GSMUA_AchrUn_... | Banana | plastid | 75.36 | 74.71 |
| EES12890 | Sorghum | plastid | 71.01 | 70.81 |
| HORVU6Hr1G063770.1 | Barley | peroxisome | 69.86 | 69.65 |
| Os05t0313500-01 | Rice | peroxisome, plastid | 66.96 | 68.96 |
| Zm00001d002246_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome | 69.86 | 68.86 |
| TraesCS6A01G246800.1 | Wheat | peroxisome | 68.7 | 68.5 |
| TraesCS6B01G277800.1 | Wheat | peroxisome | 68.41 | 68.21 |
| TraesCS6D01G229000.1 | Wheat | peroxisome | 68.12 | 67.92 |
| Solyc03g095320.1.1 | Tomato | cytosol, plastid | 16.81 | 65.91 |
| Bra003241.1-P | Field mustard | cytosol | 73.91 | 54.6 |
| VIT_00s0301g00170.t01 | Wine grape | cytosol | 24.93 | 26.96 |
| VIT_00s0301g00180.t01 | Wine grape | cytosol | 23.77 | 25.23 |
| VIT_15s0048g01710.t01 | Wine grape | cytosol, peroxisome, plastid | 23.77 | 24.92 |
| VIT_01s0127g00740.t01 | Wine grape | plastid | 25.8 | 23.61 |
| VIT_09s0002g08470.t01 | Wine grape | cytosol | 22.61 | 23.42 |
| VIT_09s0002g08480.t01 | Wine grape | cytosol | 21.45 | 22.36 |
| VIT_07s0151g00200.t01 | Wine grape | cytosol, mitochondrion, plastid | 15.94 | 22.18 |
| VIT_19s0014g01890.t01 | Wine grape | mitochondrion | 22.9 | 21.88 |
| VIT_07s0151g00260.t01 | Wine grape | cytosol | 20.87 | 21.3 |
| VIT_09s0002g07820.t01 | Wine grape | cytosol | 6.96 | 20.87 |
| VIT_07s0151g00090.t01 | Wine grape | mitochondrion | 21.45 | 19.32 |
| VIT_09s0002g07690.t01 | Wine grape | cytosol | 9.86 | 18.78 |
| VIT_09s0002g07840.t01 | Wine grape | cytosol | 15.36 | 18.34 |
| VIT_09s0002g07580.t01 | Wine grape | peroxisome | 16.52 | 18.27 |
| VIT_14s0036g00560.t01 | Wine grape | cytosol | 8.41 | 18.24 |
| VIT_09s0070g00550.t01 | Wine grape | cytosol | 7.83 | 17.2 |
| VIT_09s0002g07620.t01 | Wine grape | cytosol | 13.91 | 16.27 |
| VIT_09s0002g07760.t01 | Wine grape | cytosol | 10.72 | 14.29 |
Protein Annotations
| EntrezGene:100253655 | wikigene:100253655 | Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | MapMan:50.1.3 | InterPro:ADH_C |
| InterPro:ADH_N | ProteinID:CBI25517 | ProteinID:CBI25517.3 | UniProt:D7T4T5 | EMBL:FN595514 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:GroES-like_sf | EntrezGene:LOC100253655 |
| wikigene:LOC100253655 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00107 | PFAM:PF08240 | InterPro:PKS_ER | PANTHER:PTHR43677 |
| PANTHER:PTHR43677:SF4 | SMART:SM00829 | SUPFAM:SSF50129 | SUPFAM:SSF51735 | TIGR:TC59434 | UniParc:UPI00015CB057 |
| ArrayExpress:VIT_13s0067g00160 | EnsemblPlantsGene:VIT_13s0067g00160 | EnsemblPlants:VIT_13s0067g00160.t01 | unigene:Vvi.16822 | RefSeq:XP_002267177 | RefSeq:XP_002267177.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr13:+:112394..116065
Molecular Weight (calculated)
36811.9 Da
IEP (calculated)
9.061
GRAVY (calculated)
0.286
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MEALVCRKVG DPTLSDETSP ISVSASHLIP SLNSPTAVRV RVRATSLNYA NYLQILGKYQ EKPPHPFIPG SDYSGIVESV GPSVSMFKIG DTVCSVAALG
101: SFAQYIVVDE TELFRVPDGC DLVAAAALPV AFGTSHVALV HRAQLTSAQV LLVLGAAGGV GLAAVQIGKV CGATVIAVAR GAGKVQILKS LGVDHVVDSS
201: IENVTESVKN FLKAKKLKGV DVLYDPVGGK LTKETMKLLN WGAHILVIGF ASGEVPVIPA NIALVKNWTV HGLYWGSYRI HRPGVLEDSM KELLSWLARG
301: LIEIHISHSY NLSEAHFAFS AIKDRKAIGK VMIAFDDHKT VRSKL
101: SFAQYIVVDE TELFRVPDGC DLVAAAALPV AFGTSHVALV HRAQLTSAQV LLVLGAAGGV GLAAVQIGKV CGATVIAVAR GAGKVQILKS LGVDHVVDSS
201: IENVTESVKN FLKAKKLKGV DVLYDPVGGK LTKETMKLLN WGAHILVIGF ASGEVPVIPA NIALVKNWTV HGLYWGSYRI HRPGVLEDSM KELLSWLARG
301: LIEIHISHSY NLSEAHFAFS AIKDRKAIGK VMIAFDDHKT VRSKL
001: MEALVCRKLG DPTATNPGSP ESPVEVSKTH PIPSLNSDTS VRVRVIATSL NYANYLQILG KYQEKPPLPF IPGSDYSGIV DAIGPAVTKF RVGDRVCSFA
101: DLGSFAQFIV ADQSRLFLVP ERCDMVAAAA LPVAFGTSHV ALVHRARLTS GQVLLVLGAA GGVGLAAVQI GKVCGAIVIA VARGTEKIQL LKSMGVDHVV
201: DLGTENVISS VKEFIKTRKL KGVDVLYDPV GGKLTKESMK VLKWGAQILV IGFASGEIPV IPANIALVKN WTVHGLYWGS YRIHQPNVLE DSIKELLSWL
301: SRGLITIHIS HTYSLSQANL AFGDLKDRKA IGKVMIALDH KTALSSKL
101: DLGSFAQFIV ADQSRLFLVP ERCDMVAAAA LPVAFGTSHV ALVHRARLTS GQVLLVLGAA GGVGLAAVQI GKVCGAIVIA VARGTEKIQL LKSMGVDHVV
201: DLGTENVISS VKEFIKTRKL KGVDVLYDPV GGKLTKESMK VLKWGAQILV IGFASGEIPV IPANIALVKN WTVHGLYWGS YRIHQPNVLE DSIKELLSWL
301: SRGLITIHIS HTYSLSQANL AFGDLKDRKA IGKVMIALDH KTALSSKL
Arabidopsis Description
GroES-like zinc-binding alcohol dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LXZ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.