Factsheet for Zm00001d002246_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:

peroxisome 2
endoplasmic reticulum 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d000055_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56460.1	Zm00001d000055_P001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12890	Sorghum	plastid	94.86	95.95
HORVU6Hr1G063770.1	Barley	peroxisome	87.43	88.44
TraesCS6A01G246800.1	Wheat	peroxisome	86.0	86.99
TraesCS6B01G277800.1	Wheat	peroxisome	86.0	86.99
TraesCS6D01G229000.1	Wheat	peroxisome	85.71	86.71
Os05t0313500-01	Rice	peroxisome, plastid	81.43	85.07
Solyc03g095360.2.1	Tomato	plastid	72.0	72.41
GSMUA_AchrUn_...	Banana	plastid	70.0	70.4
VIT_13s0067g00160.t01	Wine grape	peroxisome	68.86	69.86
KRH64241	Soybean	nucleus	68.0	68.79
CDX67648	Canola	extracellular	44.0	68.75
AT3G56460.1	Thale cress	cytosol	68.0	68.39
KRH53690	Soybean	cytosol, peroxisome, plasma membrane	67.71	68.3
CDY32016	Canola	peroxisome	67.71	68.1
Solyc03g095320.1.1	Tomato	cytosol, plastid	16.29	64.77
Bra003241.1-P	Field mustard	cytosol	68.29	51.18
Zm00001d032332_P001	Maize	plastid	28.0	25.39
Zm00001d051987_P001	Maize	cytosol	21.43	24.51
Zm00001d018418_P002	Maize	cytosol	23.71	24.41
Zm00001d027276_P001	Maize	extracellular	24.86	23.39
Zm00001d025166_P001	Maize	plastid	24.29	23.04
Zm00001d043432_P001	Maize	mitochondrion	23.14	22.31
Zm00001d021025_P001	Maize	mitochondrion, peroxisome, plastid	21.71	21.97
Zm00001d042260_P002	Maize	mitochondrion	21.14	19.89
Zm00001d006069_P001	Maize	peroxisome	20.86	19.62

Protein Annotations

EntrezGene:100284173	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	UniProt:A0A1D6DYL5	InterPro:ADH_C
InterPro:ADH_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM13666.1	PFAM:PF00107
PFAM:PF08240	InterPro:PKS_ER	PANTHER:PTHR43677	PANTHER:PTHR43677:SF4	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI000842C71B	EnsemblPlantsGene:Zm00001d002246	EnsemblPlants:Zm00001d002246_P001	EnsemblPlants:Zm00001d002246_T001	SEG:seg

Description

polyketide synthesis homolog1 polyketide synthesis homolog1

Coordinates

chr2:+:8903282..8911060

Molecular Weight (calculated)

36821.8 Da

IEP (calculated)

8.870

GRAVY (calculated)

0.335

Length

350 amino acids

Sequence
(BLAST)

001: MEALVVRQLG DPTLPPGGEA SPFAAVSGDH PVPEISSPTA VRVRVAATSL NFATFLQVQG KYQERPPLPF VPGSDYSGVV DAVGPGVRGL RPGDRVCSFT
101: GLGSFADFIV AEEKQLFLVP DGCDLVTAGA LPVAFGTSHL ALVHRAQLKA GQVSFNVLLV LGAAGGVGAS AVQIGKVCGA VVIAVARGAE KSDYLKSIGA
201: DHVIDSSKDN VIESAKSFLK ARGLKGVDVL YDPVGGKLTQ DSLKLLNWGA QILVIGFASG DVPVIRANIA LVKNWTVHGL YWGSYLTHRP QVLIDSLNEL
301: LSWLSKGLIT VQISHCYRLV EVHLAFSALR DRKAVGKVMI VMGSSAVPRL

Best Arabidopsis Sequence Match ( AT3G56460.1 )
(BLAST)

001: MEALVCRKLG DPTATNPGSP ESPVEVSKTH PIPSLNSDTS VRVRVIATSL NYANYLQILG KYQEKPPLPF IPGSDYSGIV DAIGPAVTKF RVGDRVCSFA
101: DLGSFAQFIV ADQSRLFLVP ERCDMVAAAA LPVAFGTSHV ALVHRARLTS GQVLLVLGAA GGVGLAAVQI GKVCGAIVIA VARGTEKIQL LKSMGVDHVV
201: DLGTENVISS VKEFIKTRKL KGVDVLYDPV GGKLTKESMK VLKWGAQILV IGFASGEIPV IPANIALVKN WTVHGLYWGS YRIHQPNVLE DSIKELLSWL
301: SRGLITIHIS HTYSLSQANL AFGDLKDRKA IGKVMIALDH KTALSSKL

Arabidopsis Description

GroES-like zinc-binding alcohol dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LXZ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.