Factsheet for Zm00001d018418_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G358100.1	Wheat	peroxisome	83.82	87.16
Os02t0805600-01	Rice	plasma membrane	83.53	86.59
Zm00001d051987_P001	Maize	cytosol	77.35	85.95
TraesCS6B01G411600.1	Wheat	peroxisome	82.65	85.93
TraesCS6A01G373900.1	Wheat	golgi	82.65	85.93
TraesCS6D01G358200.1	Wheat	cytosol	80.59	83.79
TraesCS6B01G411700.1	Wheat	cytosol	77.94	81.04
TraesCS6A01G374000.1	Wheat	cytosol	73.53	77.4
GSMUA_Achr4P15790_001	Banana	cytosol	73.24	76.62
HORVU6Hr1G088160.7	Barley	cytosol, mitochondrion, peroxisome	78.53	76.5
PGSC0003DMT400057744	Potato	cytosol	70.88	74.15
Solyc02g078940.2.1	Tomato	extracellular	70.29	73.54
KRH10765	Soybean	cytosol, peroxisome, plastid	69.12	72.31
AT4G21580.1	Thale cress	cytosol	65.88	68.92
Bra013540.1-P	Field mustard	cytosol	65.59	68.62
CDX82839	Canola	cytosol	65.59	68.62
CDX79076	Canola	cytosol, peroxisome, plastid	38.24	64.68
VIT_09s0002g07820.t01	Wine grape	cytosol	20.88	61.74
Zm00001d027276_P001	Maize	extracellular	28.82	26.34
Zm00001d021025_P001	Maize	mitochondrion, peroxisome, plastid	26.18	25.72
Zm00001d002246_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	24.41	23.71
Zm00001d025166_P001	Maize	plastid	25.59	23.58
Zm00001d006069_P001	Maize	peroxisome	25.29	23.12
Zm00001d042260_P002	Maize	mitochondrion	25.29	23.12
Zm00001d043432_P001	Maize	mitochondrion	24.41	22.86
Zm00001d032332_P001	Maize	plastid	25.29	22.28

Protein Annotations

EntrezGene:100284272	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	UniProt:A0A1D6HNQ2	InterPro:ADH_C
InterPro:ADH_N	ProteinID:AQK75921.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	PANTHER:PTHR43006	PANTHER:PTHR43006:SF7	InterPro:Quinone_OxRdtase_PIG3	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	TIGRFAMs:TIGR02824	UniParc:UPI0008454CE3	EnsemblPlantsGene:Zm00001d018418	EnsemblPlants:Zm00001d018418_P002	EnsemblPlants:Zm00001d018418_T002
SEG:seg	:	:	:	:	:

Description

oxidoreductase zinc-binding dehydrogenase family protein

Coordinates

chr5:+:220374274..220377334

Molecular Weight (calculated)

35601.3 Da

IEP (calculated)

6.859

GRAVY (calculated)

0.236

Length

340 amino acids

Sequence
(BLAST)

001: MRMRAVVITC AGGPEVLEAR EVEDHPALGE GEVLLEVAAA GVNRADTVQR MGRYPPPAGA SPYPGLECSG TILALGPNVP SRWAVGDKVC ALLSGGGYAD
101: KVVAPAGQLL PIPEGVSLTH AAGLPEVACT VWSTVFMTSH LSPGESFLIH GGSSGIGTFA IQIAKHLGIK VFVTAGSEEK LAACKALGAD VCINYRTEDF
201: VERIKQETNG KGTTSMLSFL AASVDVILDN IGGSYLQRNL NSLGVDGRLF IIGFQGGIAA EVNLQAVLAR RLTIQAAGLR NRSLANKAEI VSEVEKNVWP
301: AVAAGKVKPV IYKTFPLCEA AEAHRLMEAS THIGKILLLP

Best Arabidopsis Sequence Match ( AT4G21580.1 )
(BLAST)

001: MKAIVISEPG KPEVLQLRDV ADPEVKDDEV LIRVLATALN RADTLQRLGL YNPPPGSSPY LGLECSGTIE SVGKGVSRWK VGDQVCALLS GGGYAEKVSV
101: PAGQIFPIPA GISLKDAAAF PEVACTVWST VFMMGRLSVG ESFLIHGGSS GIGTFAIQIA KHLGVRVFVT AGSDEKLAAC KELGADVCIN YKTEDFVAKV
201: KAETDGKGVD VILDCIGAPY LQKNLDSLNF DGRLCIIGLM GGANAEIKLS SLLPKRLTVL GAALRPRSPE NKAVVVREVE KNVWPAIEAG KVKPVIYKYL
301: PLSQAAEGHS LMESSNHIGK ILLET

Arabidopsis Description

AT4g21580/F18E5_200 [Source:UniProtKB/TrEMBL;Acc:O65423]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.