Factsheet for Zm00001d051987_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU85913	Sorghum	cytosol	91.5	85.37
Os02t0805600-01	Rice	plasma membrane	83.01	77.44
Zm00001d018418_P002	Maize	cytosol	85.95	77.35
TraesCS6D01G358100.1	Wheat	peroxisome	82.35	77.06
TraesCS6B01G411600.1	Wheat	peroxisome	80.39	75.23
TraesCS6D01G358200.1	Wheat	cytosol	80.39	75.23
TraesCS6A01G373900.1	Wheat	golgi	80.07	74.92
TraesCS6B01G411700.1	Wheat	cytosol	78.43	73.39
TraesCS6A01G374000.1	Wheat	cytosol	72.88	69.04
GSMUA_Achr4P15790_001	Banana	cytosol	72.88	68.62
HORVU6Hr1G088160.7	Barley	cytosol, mitochondrion, peroxisome	77.78	68.19
PGSC0003DMT400057744	Potato	cytosol	70.26	66.15
Solyc02g078940.2.1	Tomato	extracellular	69.93	65.85
KRH10765	Soybean	cytosol, peroxisome, plastid	68.95	64.92
CDX82839	Canola	cytosol	66.99	63.08
VIT_09s0002g07820.t01	Wine grape	cytosol	23.53	62.61
Bra013540.1-P	Field mustard	cytosol	66.01	62.15
AT4G21580.1	Thale cress	cytosol	66.01	62.15
CDX79076	Canola	cytosol, peroxisome, plastid	35.62	54.23
Zm00001d027276_P001	Maize	extracellular	32.03	26.34
Zm00001d021025_P001	Maize	mitochondrion, peroxisome, plastid	27.45	24.28
Zm00001d025166_P001	Maize	plastid	27.12	22.49
Zm00001d002246_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	24.51	21.43
Zm00001d032332_P001	Maize	plastid	26.14	20.73
Zm00001d006069_P001	Maize	peroxisome	24.84	20.43
Zm00001d042260_P002	Maize	mitochondrion	24.84	20.43
Zm00001d043432_P001	Maize	mitochondrion	24.18	20.39

Protein Annotations

Gene3D:3.90.180.10	MapMan:50.1.3	UniProt:A0A1D6QBR6	InterPro:ADH_C	InterPro:ADH_N	ProteinID:AQK55687.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	PANTHER:PTHR43006
PANTHER:PTHR43006:SF7	InterPro:Quinone_OxRdtase_PIG3	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000843A684
EnsemblPlantsGene:Zm00001d051987	EnsemblPlants:Zm00001d051987_P001	EnsemblPlants:Zm00001d051987_T001	SEG:seg	:	:

Description

oxidoreductase zinc-binding dehydrogenase family protein

Coordinates

chr4:-:175915558..175917842

Molecular Weight (calculated)

31733.4 Da

IEP (calculated)

5.964

GRAVY (calculated)

0.158

Length

306 amino acids

Sequence
(BLAST)

001: MRAVVITRGG GGPEVLEAQE VEDPAPLGDG EVLLQVVAAG VNRADTLQRH GRHPPPAGAP PYPGLECSGT ILALGPNAPP RWAVGDKVCA LLSGGGYAEK
101: VVVPAGQLLP VPEGVSLADA AGLPEIHGGS SGIGTFAIQI AKHLGIMVFV TAGTEEKLAA CKGLGADVCI NYKTEDFVER VKQETNGKGV DVILDNIGGP
201: YLERNLNSLG VDGRLFIIGF QGGAVAEVNL QAVFAWRLTI QAAGLRGRSA ASKTQIVSEV EKNVWPAVAA GKVNPVIYKT FPLSEAADAH RLIESSMHIG
301: KILLLP

Best Arabidopsis Sequence Match ( AT4G21580.1 )
(BLAST)

001: MKAIVISEPG KPEVLQLRDV ADPEVKDDEV LIRVLATALN RADTLQRLGL YNPPPGSSPY LGLECSGTIE SVGKGVSRWK VGDQVCALLS GGGYAEKVSV
101: PAGQIFPIPA GISLKDAAAF PEVACTVWST VFMMGRLSVG ESFLIHGGSS GIGTFAIQIA KHLGVRVFVT AGSDEKLAAC KELGADVCIN YKTEDFVAKV
201: KAETDGKGVD VILDCIGAPY LQKNLDSLNF DGRLCIIGLM GGANAEIKLS SLLPKRLTVL GAALRPRSPE NKAVVVREVE KNVWPAIEAG KVKPVIYKYL
301: PLSQAAEGHS LMESSNHIGK ILLET

Arabidopsis Description

AT4g21580/F18E5_200 [Source:UniProtKB/TrEMBL;Acc:O65423]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.