Factsheet for Zm00001d025166_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 2
peroxisome 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 20089766
plastid: 22065420

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10573	Sorghum	plastid	83.2	89.24
OQU83589	Sorghum	cytosol	72.09	83.91
TraesCS2B01G295300.1	Wheat	golgi	75.61	83.28
TraesCS2A01G277900.1	Wheat	golgi	75.07	82.69
TraesCS2D01G276900.1	Wheat	plastid	74.25	81.79
TraesCS7D01G143400.1	Wheat	cytosol	66.4	78.78
HORVU2Hr1G042270.1	Barley	cytosol, plastid	31.44	77.33
TraesCS5D01G524500.1	Wheat	mitochondrion, peroxisome, plastid	70.73	76.76
TraesCS7B01G043400.1	Wheat	cytosol, peroxisome, plastid	69.65	76.49
TraesCS7A01G142200.1	Wheat	cytosol, peroxisome, plastid	58.27	74.65
TraesCS5A01G014100.1	Wheat	plastid	67.48	74.11
Os04t0372700-01	Rice	plasma membrane	25.75	73.64
Solyc09g059030.2.1	Tomato	plastid	60.98	68.39
PGSC0003DMT400062565	Potato	cytosol, peroxisome, plastid	60.98	68.39
AT4G13010.1	Thale cress	cytosol	59.08	66.26
CDY34537	Canola	cytosol	58.81	65.96
CDX80695	Canola	cytosol	58.81	65.96
Bra001207.1-P	Field mustard	cytosol	58.81	65.96
GSMUA_Achr11P...	Banana	plasma membrane	58.81	65.76
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	43.63	64.92
Solyc09g059040.2.1	Tomato	plastid	57.72	64.74
Solyc09g059020.2.1	Tomato	cytosol, extracellular, peroxisome	47.97	64.6
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	46.34	64.53
PGSC0003DMT400044064	Potato	cytosol	57.45	64.44
PGSC0003DMT400022514	Potato	cytosol	57.18	63.94
KRG99627	Soybean	cytosol	56.64	63.53
PGSC0003DMT400044065	Potato	cytosol	56.37	62.65
KRH46629	Soybean	cytosol	55.56	62.31
Zm00001d021025_P001	Maize	mitochondrion, peroxisome, plastid	58.27	62.14
VIT_07s0151g00260.t01	Wine grape	cytosol	56.37	61.54
KRH23756	Soybean	endoplasmic reticulum	54.47	61.28
KRH44933	Soybean	cytosol, peroxisome	46.07	57.05
VIT_07s0151g00090.t01	Wine grape	mitochondrion	59.08	56.92
Zm00001d042260_P002	Maize	mitochondrion	52.57	52.15
Zm00001d006069_P001	Maize	peroxisome	52.57	52.15
PGSC0003DMT400090732	Potato	plastid	21.41	35.91
Zm00001d032332_P001	Maize	plastid	28.73	27.46
Zm00001d051987_P001	Maize	cytosol	22.49	27.12
Zm00001d043432_P001	Maize	mitochondrion	26.56	27.0
Zm00001d018418_P002	Maize	cytosol	23.58	25.59
Zm00001d002246_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	23.04	24.29
Zm00001d027276_P001	Maize	extracellular	22.22	22.04

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	UniProt:A0A1D6J5A6	InterPro:ADH_N	ProteinID:AQK43120.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF08240	PFAM:PF13602	InterPro:PKS_ER	PANTHER:PTHR44013
PANTHER:PTHR44013:SF3	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000844254E	EnsemblPlantsGene:Zm00001d025166
EnsemblPlants:Zm00001d025166_P001	EnsemblPlants:Zm00001d025166_T001	SEG:seg	:	:	:

Description

Putative quinone-oxidoreductase homolog chloroplastic

Coordinates

chr10:-:107141907..107144555

Molecular Weight (calculated)

38881.2 Da

IEP (calculated)

8.855

GRAVY (calculated)

0.090

Length

369 amino acids

Sequence
(BLAST)

001: MAAASTKTAN IPATMRAVQY DSCGGGAAGL KAEKYSLCFE NRSFVFLQRN QSTEFQIPLM QHVEVPVPSA KKNELLLKLE AASINPVDWK VQKGMLRPFL
101: PRKLPFIPVT DVAGVVADVG PGINGFQAGD QVVAMLNSFN GGGLAEYAVA SENLTVKRPP EVSAAEGAGL PIAAGTALQA LRTIGAKFDG TGKPMNVLVT
201: AASGGVGLYA VQLAKRAGLH VTATCGARNV ELVKSLGADE VLDYRTPEGA TLQSPSGKKY DGVVHCTVGT SWSTFEPVLA ATGKVIDITP NLTAILKSAL
301: HSVTFARKRL VPLLLSPNKA DLEFLVGLLK DGKLETLIDS RFPLSEVSKA WEKSIEGHAT GKIIVEMGD

Best Arabidopsis Sequence Match ( AT4G13010.1 )
(BLAST)

001: MAGKLMHALQ YNSYGGGAAG LEHVQVPVPT PKSNEVCLKL EATSLNPVDW KIQKGMIRPF LPRKFPCIPA TDVAGEVVEV GSGVKNFKAG DKVVAVLSHL
101: GGGGLAEFAV ATEKLTVKRP QEVGAAEAAA LPVAGLTALQ ALTNPAGLKL DGTGKKANIL VTAASGGVGH YAVQLAKLAN AHVTATCGAR NIEFVKSLGA
201: DEVLDYKTPE GAALKSPSGK KYDAVVHCAN GIPFSVFEPN LSENGKVIDI TPGPNAMWTY AVKKITMSKK QLVPLLLIPK AENLEFMVNL VKEGKVKTVI
301: DSKHPLSKAE DAWAKSIDGH ATGKIIVEP

Arabidopsis Description

CEQORHChloroplast envelope quinone oxidoreductase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9SV68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.