Factsheet for TraesCS5D01G524500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid

Predictor Summary:

plastid 2
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome, plastid
Any Predictor:	mitochondrion, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G143400.1	Wheat	cytosol	77.35	84.57
TraesCS2D01G276900.1	Wheat	plastid	82.35	83.58
HORVU2Hr1G042270.1	Barley	cytosol, plastid	35.29	80.0
EES10573	Sorghum	plastid	75.59	74.71
OQU83589	Sorghum	cytosol	67.94	72.87
Os04t0372700-01	Rice	plasma membrane	27.65	72.87
Zm00001d025166_P001	Maize	plastid	76.76	70.73
PGSC0003DMT400062565	Potato	cytosol, peroxisome, plastid	63.53	65.65
Solyc09g059030.2.1	Tomato	plastid	62.35	64.44
PGSC0003DMT400044064	Potato	cytosol	61.18	63.22
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	45.59	62.5
Solyc09g059040.2.1	Tomato	plastid	60.29	62.31
Solyc09g059020.2.1	Tomato	cytosol, extracellular, peroxisome	49.71	61.68
KRH23756	Soybean	endoplasmic reticulum	59.41	61.59
AT4G13010.1	Thale cress	cytosol	59.41	61.4
TraesCS5D01G287700.1	Wheat	golgi	60.29	61.01
Bra001207.1-P	Field mustard	cytosol	58.82	60.79
CDX80695	Canola	cytosol	58.82	60.79
CDY34537	Canola	cytosol	58.82	60.79
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	46.76	60.0
GSMUA_Achr11P...	Banana	plasma membrane	57.94	59.7
KRG99627	Soybean	cytosol	57.06	58.97
VIT_07s0151g00260.t01	Wine grape	cytosol	58.53	58.88
KRH46629	Soybean	cytosol	56.47	58.36
PGSC0003DMT400022514	Potato	cytosol	56.18	57.88
PGSC0003DMT400044065	Potato	cytosol	56.18	57.53
TraesCS3D01G494500.1	Wheat	cytosol, peroxisome, plastid	55.29	57.14
TraesCS2D01G276600.1	Wheat	cytosol, mitochondrion, plastid	54.12	56.62
TraesCS2D01G276700.1	Wheat	mitochondrion	55.0	56.5
KRH44933	Soybean	cytosol, peroxisome	49.12	56.04
VIT_07s0151g00090.t01	Wine grape	mitochondrion	61.18	54.31
TraesCS5D01G287300.2	Wheat	plastid	55.29	51.09
PGSC0003DMT400090732	Potato	plastid	21.18	32.73
TraesCS6D01G358100.1	Wheat	peroxisome	27.65	28.75
TraesCS6D01G358200.1	Wheat	cytosol	27.06	28.13
TraesCS6D01G122800.1	Wheat	plastid	30.0	26.63
TraesCS3D01G291700.2	Wheat	mitochondrion	27.65	25.9
TraesCS6D01G229000.1	Wheat	peroxisome	23.24	22.83
TraesCS4D01G365600.1	Wheat	plastid	20.88	18.59

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf
PFAM:PF08240	PFAM:PF13602	InterPro:PKS_ER	PANTHER:PTHR44013	PANTHER:PTHR44013:SF3	SMART:SM00829
SUPFAM:SSF50129	SUPFAM:SSF51735	EnsemblPlantsGene:TraesCS5D01G524500	EnsemblPlants:TraesCS5D01G524500.1	TIGR:cd08267	SEG:seg

Description

No Description!

Coordinates

chr5D:-:543586069..543587551

Molecular Weight (calculated)

35168.1 Da

IEP (calculated)

9.386

GRAVY (calculated)

0.286

Length

340 amino acids

Sequence
(BLAST)

001: MATPAATPPA KMRAVLYDAC GGGSAGLKHV EVPVPSAKKN EVLLKVEAAA INPLDCKIQK GDLRPLLPRR LPFIPVTDVA GVVVGVGLGV EGLIVGDQVV
101: AMLKSLNGGG LAEYAVASAN LTVRRPPEVC AAEGAGLPIA AGTALQALRS IGAKFHLDGA GSKPLNVLIT AASGGVGLYA VQLAKLANLH VTATCGARNM
201: DLVKGLGADE VMDYRTPEGA SLLSPSGAKY DGVVHCTVGV SWSSFRPLLS DAGGRVIDIT PNLWAILRYI LHGVTFSKKR LVPLLVSPNK ADLEFLVALL
301: RDGKLKTVID SRFPLGDAGK AWQTSIEGHA TGKIVVDTQS

Best Arabidopsis Sequence Match ( AT4G13010.1 )
(BLAST)

001: MAGKLMHALQ YNSYGGGAAG LEHVQVPVPT PKSNEVCLKL EATSLNPVDW KIQKGMIRPF LPRKFPCIPA TDVAGEVVEV GSGVKNFKAG DKVVAVLSHL
101: GGGGLAEFAV ATEKLTVKRP QEVGAAEAAA LPVAGLTALQ ALTNPAGLKL DGTGKKANIL VTAASGGVGH YAVQLAKLAN AHVTATCGAR NIEFVKSLGA
201: DEVLDYKTPE GAALKSPSGK KYDAVVHCAN GIPFSVFEPN LSENGKVIDI TPGPNAMWTY AVKKITMSKK QLVPLLLIPK AENLEFMVNL VKEGKVKTVI
301: DSKHPLSKAE DAWAKSIDGH ATGKIIVEP

Arabidopsis Description

CEQORHChloroplast envelope quinone oxidoreductase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9SV68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.