Factsheet for GSMUA_AchrUn_randomP13600_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
peroxisome 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	plasma membrane	70.94	56.97
HORVU2Hr1G042270.1	Barley	cytosol, plastid	31.7	56.0
PGSC0003DMT400062565	Potato	cytosol, peroxisome, plastid	68.3	55.02
Solyc09g059030.2.1	Tomato	plastid	66.79	53.8
PGSC0003DMT400044064	Potato	cytosol	66.42	53.5
Os04t0372700-01	Rice	plasma membrane	26.04	53.49
Bra001207.1-P	Field mustard	cytosol	65.66	52.89
Solyc09g059040.2.1	Tomato	plastid	65.66	52.89
CDX80695	Canola	cytosol	65.66	52.89
CDY34537	Canola	cytosol	65.66	52.89
AT4G13010.1	Thale cress	cytosol	65.28	52.58
KRG99627	Soybean	cytosol	63.77	51.37
KRH46629	Soybean	cytosol	63.4	51.06
PGSC0003DMT400044065	Potato	cytosol	63.02	50.3
OQU83589	Sorghum	cytosol	60.0	50.16
PGSC0003DMT400022514	Potato	cytosol	62.26	50.0
GSMUA_Achr6P27730_001	Banana	cytosol	46.79	49.01
TraesCS2A01G277900.1	Wheat	golgi	61.89	48.96
GSMUA_Achr2P06110_001	Banana	mitochondrion	61.51	48.95
Solyc09g059020.2.1	Tomato	cytosol, extracellular, peroxisome	50.57	48.91
EES10573	Sorghum	plastid	63.4	48.84
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	45.66	48.79
TraesCS2B01G295300.1	Wheat	golgi	61.51	48.66
GSMUA_Achr2P06100_001	Banana	mitochondrion	44.53	48.16
TraesCS2D01G276900.1	Wheat	plastid	60.75	48.06
KRH23756	Soybean	endoplasmic reticulum	58.87	47.56
TraesCS7D01G143400.1	Wheat	cytosol	55.47	47.27
VIT_07s0151g00260.t01	Wine grape	cytosol	60.0	47.04
TraesCS7B01G043400.1	Wheat	cytosol, peroxisome, plastid	59.62	47.02
TraesCS5D01G524500.1	Wheat	mitochondrion, peroxisome, plastid	60.0	46.76
Zm00001d025166_P001	Maize	plastid	64.53	46.34
VIT_07s0151g00090.t01	Wine grape	mitochondrion	66.04	45.69
TraesCS5A01G014100.1	Wheat	plastid	56.6	44.64
KRH44933	Soybean	cytosol, peroxisome	49.06	43.62
TraesCS7A01G142200.1	Wheat	cytosol, peroxisome, plastid	44.91	41.32
PGSC0003DMT400090732	Potato	plastid	30.19	36.36
GSMUA_Achr4P07780_001	Banana	cytosol	27.17	23.3
GSMUA_Achr4P15790_001	Banana	cytosol	27.17	22.15
GSMUA_Achr8P27200_001	Banana	mitochondrion	27.55	19.78
GSMUA_AchrUn_...	Banana	plastid	24.91	18.97
GSMUA_Achr3P15520_001	Banana	mitochondrion	25.28	18.21
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane, vacuole	17.74	16.38

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_C	InterPro:ADH_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_AchrUn_randomG13600_001
EnsemblPlants:GSMUA_AchrUn_randomP13600_001	EnsemblPlants:GSMUA_AchrUn_randomT13600_001	InterPro:GroES-like_sf	UniProt:M0U8W9	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107
PFAM:PF08240	InterPro:PKS_ER	PANTHER:PTHR44013	PANTHER:PTHR44013:SF3	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI000295E102	SEG:seg	:	:	:

Description

Quinone-oxidoreductase homolog, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG13600_001]

Coordinates

chrchrUn_random:+:64539877..64546148

Molecular Weight (calculated)

27894.7 Da

IEP (calculated)

8.038

GRAVY (calculated)

0.029

Length

265 amino acids

Sequence
(BLAST)

001: MATKIMKAVQ YEGYGGGAAG LKYTEIPIPS PKKDEVLLKL EATSVNPIDW KVQKGMLRPF LPPRFPFVPG VDVTGEVSEA GPEVADFKRG DKVIAMLSLP
101: NSGGLAEFAV APTNMTVSRP AELSPAEGAG LPTAALIALQ ALRAAGTTKF DCTGKSSNIL ITAASGGVGH YAVQLAKLAG LHVTATCGDR NVEFVKQLGA
201: DEVLDYKTPQ GASLTSPSGK KYDAVIHCAS GIPWSTFEPN LSAYGTVIDI SPSFKSMVMK YDLFR

Best Arabidopsis Sequence Match ( AT4G13010.1 )
(BLAST)

001: MAGKLMHALQ YNSYGGGAAG LEHVQVPVPT PKSNEVCLKL EATSLNPVDW KIQKGMIRPF LPRKFPCIPA TDVAGEVVEV GSGVKNFKAG DKVVAVLSHL
101: GGGGLAEFAV ATEKLTVKRP QEVGAAEAAA LPVAGLTALQ ALTNPAGLKL DGTGKKANIL VTAASGGVGH YAVQLAKLAN AHVTATCGAR NIEFVKSLGA
201: DEVLDYKTPE GAALKSPSGK KYDAVVHCAN GIPFSVFEPN LSENGKVIDI TPGPNAMWTY AVKKITMSKK QLVPLLLIPK AENLEFMVNL VKEGKVKTVI
301: DSKHPLSKAE DAWAKSIDGH ATGKIIVEP

Arabidopsis Description

CEQORHChloroplast envelope quinone oxidoreductase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9SV68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.