Factsheet for GSMUA_Achr2P06110_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 5
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P06100_001	Banana	mitochondrion	68.47	93.06
GSMUA_Achr6P27730_001	Banana	cytosol	54.35	71.54
TraesCS3B01G548400.1	Wheat	cytosol, peroxisome, plastid	42.94	65.6
TraesCS2A01G277700.1	Wheat	plastid	43.84	64.6
Solyc09g059030.2.1	Tomato	plastid	61.56	62.31
PGSC0003DMT400044064	Potato	cytosol	61.26	62.01
Solyc09g059040.2.1	Tomato	plastid	61.26	62.01
GSMUA_Achr11P...	Banana	plasma membrane	60.96	61.52
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	48.95	61.51
Bra001207.1-P	Field mustard	cytosol	60.36	61.09
CDX80695	Canola	cytosol	60.36	61.09
CDY34537	Canola	cytosol	60.36	61.09
AT4G13010.1	Thale cress	cytosol	60.36	61.09
TraesCS2D01G276600.1	Wheat	cytosol, mitochondrion, plastid	59.46	60.92
PGSC0003DMT400062565	Potato	cytosol, peroxisome, plastid	60.06	60.79
TraesCS3D01G494500.1	Wheat	cytosol, peroxisome, plastid	59.76	60.49
KRG99627	Soybean	cytosol	59.46	60.18
TraesCS2B01G295100.1	Wheat	plastid	58.56	60.0
KRH46629	Soybean	cytosol	59.16	59.88
TraesCS2B01G295200.1	Wheat	plastid	58.26	58.97
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	43.84	58.87
PGSC0003DMT400022514	Potato	cytosol	58.26	58.79
HORVU2Hr1G068010.1	Barley	mitochondrion, plastid	57.96	58.66
Os04t0359100-01	Rice	plasma membrane	58.26	58.43
PGSC0003DMT400044065	Potato	cytosol	58.26	58.43
TraesCS2D01G276700.1	Wheat	mitochondrion	57.96	58.31
VIT_07s0151g00260.t01	Wine grape	cytosol	59.16	58.28
Solyc09g059020.2.1	Tomato	cytosol, extracellular, peroxisome	47.75	58.03
KRH23756	Soybean	endoplasmic reticulum	55.56	56.4
Os04t0358000-01	Rice	endoplasmic reticulum	53.15	55.84
VIT_07s0151g00090.t01	Wine grape	mitochondrion	62.16	54.05
HORVU2Hr1G067980.1	Barley	extracellular	58.56	53.57
KRH44933	Soybean	cytosol, peroxisome	47.15	52.68
Os04t0359700-00	Rice	cytosol, mitochondrion, peroxisome, plastid	56.16	51.8
HORVU2Hr1G076890.1	Barley	cytosol	25.83	40.0
PGSC0003DMT400090732	Potato	plastid	21.92	33.18
GSMUA_Achr4P07780_001	Banana	cytosol	28.83	31.07
GSMUA_Achr4P15790_001	Banana	cytosol	26.13	26.77
GSMUA_Achr3P15520_001	Banana	mitochondrion	26.13	23.64
GSMUA_AchrUn_...	Banana	plastid	24.62	23.56
GSMUA_Achr8P27200_001	Banana	mitochondrion	25.53	23.04
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane, vacuole	18.92	21.95

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr2G06110_001	EnsemblPlants:GSMUA_Achr2P06110_001
EnsemblPlants:GSMUA_Achr2T06110_001	InterPro:GroES-like_sf	UniProt:M0S5K2	InterPro:NAD(P)-bd_dom_sf	PFAM:PF08240	PFAM:PF13602
InterPro:PKS_ER	PANTHER:PTHR44013	PANTHER:PTHR44013:SF3	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
UniParc:UPI0002957D0E	SEG:seg	:	:	:	:

Description

Quinone-oxidoreductase homolog, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr2G06110_001]

Coordinates

chr2:-:11007321..11009180

Molecular Weight (calculated)

35082.6 Da

IEP (calculated)

8.587

GRAVY (calculated)

0.060

Length

333 amino acids

Sequence
(BLAST)

001: MAARTMRAVQ YGGYGGGAAA LQHVEIQVPS PKKDEVLLRV EAASMNPADW KIQKGMMRPF LPSKLPFVPV SDVAGEVVEV GPGVDGFKPG DKVVTWLGFK
101: AGGLAEYAIA PVNVTAHIPP EVSAEGAAGL PIAACSALQA LRYATTKFDG TGDPANVLIT AASGGVGTFA VQLAKLGNLH VTATCGARNM ELVRSLGADE
201: VLDYKTPEGK SLKSPSGRKY DIVVHCTSSV GWSSLESNLA AHGKVVDLNP SPGGFLRSAL KQLTCSNKKL VLLFAMATKE DLQFLVELVK GGKLRTVIDS
301: RYALGKAEEA WAKIMEGHAT GKIIVERDQV MDI

Best Arabidopsis Sequence Match ( AT4G13010.1 )
(BLAST)

001: MAGKLMHALQ YNSYGGGAAG LEHVQVPVPT PKSNEVCLKL EATSLNPVDW KIQKGMIRPF LPRKFPCIPA TDVAGEVVEV GSGVKNFKAG DKVVAVLSHL
101: GGGGLAEFAV ATEKLTVKRP QEVGAAEAAA LPVAGLTALQ ALTNPAGLKL DGTGKKANIL VTAASGGVGH YAVQLAKLAN AHVTATCGAR NIEFVKSLGA
201: DEVLDYKTPE GAALKSPSGK KYDAVVHCAN GIPFSVFEPN LSENGKVIDI TPGPNAMWTY AVKKITMSKK QLVPLLLIPK AENLEFMVNL VKEGKVKTVI
301: DSKHPLSKAE DAWAKSIDGH ATGKIIVEP

Arabidopsis Description

CEQORHChloroplast envelope quinone oxidoreductase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9SV68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.