Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- peroxisome 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G276600.1 | Wheat | cytosol, mitochondrion, plastid | 95.69 | 95.69 |
| TraesCS3B01G548400.1 | Wheat | cytosol, peroxisome, plastid | 56.62 | 84.4 |
| HORVU2Hr1G067980.1 | Barley | extracellular | 94.46 | 84.34 |
| TraesCS2B01G295200.1 | Wheat | plastid | 84.0 | 82.98 |
| Os04t0359100-01 | Rice | plasma membrane | 74.77 | 73.19 |
| Os04t0358000-01 | Rice | endoplasmic reticulum | 67.69 | 69.4 |
| HORVU2Hr1G076890.1 | Barley | cytosol | 45.85 | 69.3 |
| GSMUA_Achr2P06100_001 | Banana | mitochondrion | 47.69 | 63.27 |
| Os04t0359700-00 | Rice | cytosol, mitochondrion, peroxisome, plastid | 69.54 | 62.6 |
| GSMUA_Achr6P27730_001 | Banana | cytosol | 47.38 | 60.87 |
| Solyc09g059030.2.1 | Tomato | plastid | 60.0 | 59.27 |
| Solyc09g059040.2.1 | Tomato | plastid | 59.69 | 58.97 |
| PGSC0003DMT400044064 | Potato | cytosol | 59.38 | 58.66 |
| GSMUA_Achr2P06110_001 | Banana | mitochondrion | 60.0 | 58.56 |
| PGSC0003DMT400062565 | Potato | cytosol, peroxisome, plastid | 58.77 | 58.05 |
| KRH23756 | Soybean | endoplasmic reticulum | 57.54 | 57.01 |
| Bra001207.1-P | Field mustard | cytosol | 57.54 | 56.84 |
| CDX80695 | Canola | cytosol | 57.54 | 56.84 |
| CDY34537 | Canola | cytosol | 57.54 | 56.84 |
| TraesCS2B01G295300.1 | Wheat | golgi | 58.46 | 56.72 |
| KRH46629 | Soybean | cytosol | 56.62 | 55.93 |
| AT4G13010.1 | Thale cress | cytosol | 56.62 | 55.93 |
| KRG99627 | Soybean | cytosol | 56.62 | 55.93 |
| VIT_07s0151g00200.t01 | Wine grape | cytosol, mitochondrion, plastid | 42.46 | 55.65 |
| PGSC0003DMT400022514 | Potato | cytosol | 56.31 | 55.45 |
| TraesCS7B01G043400.1 | Wheat | cytosol, peroxisome, plastid | 57.23 | 55.36 |
| Solyc09g059020.2.1 | Tomato | cytosol, extracellular, peroxisome | 46.15 | 54.74 |
| VIT_07s0151g00260.t01 | Wine grape | cytosol | 56.62 | 54.44 |
| PGSC0003DMT400044065 | Potato | cytosol | 55.38 | 54.22 |
| KRH44933 | Soybean | cytosol, peroxisome | 49.23 | 53.69 |
| TraesCS5B01G279900.1 | Wheat | golgi | 54.46 | 52.68 |
| VIT_07s0151g00090.t01 | Wine grape | mitochondrion | 60.31 | 51.17 |
| TraesCS5B01G279700.1 | Wheat | plastid | 52.31 | 49.85 |
| PGSC0003DMT400090732 | Potato | plastid | 20.62 | 30.45 |
| TraesCS6B01G411600.1 | Wheat | peroxisome | 30.15 | 29.97 |
| TraesCS6B01G411700.1 | Wheat | cytosol | 28.62 | 28.44 |
| TraesCS6B01G161600.1 | Wheat | plastid | 29.85 | 25.33 |
| TraesCS3B01G326600.1 | Wheat | mitochondrion | 24.92 | 22.31 |
| TraesCS6B01G277800.1 | Wheat | peroxisome | 23.69 | 22.25 |
| TraesCS4B01G371900.1 | Wheat | mitochondrion, plastid | 20.92 | 17.57 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G295100.1 | EnsemblPlantsGene:TraesCS2B01G295100 | Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:ADH_N | InterPro:GroES-like_sf |
| InterPro:NAD(P)-bd_dom_sf | InterPro:PKS_ER | PANTHER:PTHR44013 | PANTHER:PTHR44013:SF4 | PFAM:PF08240 | PFAM:PF13602 |
| SMART:SM00829 | SUPFAM:SSF50129 | SUPFAM:SSF51735 | TIGR:cd08267 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr2B:+:412178535..412180945
Molecular Weight (calculated)
34304.6 Da
IEP (calculated)
9.246
GRAVY (calculated)
0.115
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPSSMRAVQ YSGYGGGAAA LKYVDIPVPS PKKDEVLIKV EAASINPADW KIQKGMLCPF IPKFPFIPVT DVAGDIVEAG SAVQELKVGD KVVSKLVFWK
101: AGGLAEYVAA SESITVTRPA GVSAADAAGL PIAGLTALQA LKAIGTKFDG TCRGSNILIT AALGGIGTYA VQLAKLGNHN VTATCGARNL EAVMNIGADE
201: VLDYKTPEGA ALSNSSGKKY DYIVNTTTDG KWSAFKPALN CPGRVVDIAS NFWNFVASIL TFFSKKKLSI VIESMGKEDL RFLLELVKEG KLKTVGDSRH
301: PFEKAADAWE KSMSGHATGK VIVVM
101: AGGLAEYVAA SESITVTRPA GVSAADAAGL PIAGLTALQA LKAIGTKFDG TCRGSNILIT AALGGIGTYA VQLAKLGNHN VTATCGARNL EAVMNIGADE
201: VLDYKTPEGA ALSNSSGKKY DYIVNTTTDG KWSAFKPALN CPGRVVDIAS NFWNFVASIL TFFSKKKLSI VIESMGKEDL RFLLELVKEG KLKTVGDSRH
301: PFEKAADAWE KSMSGHATGK VIVVM
001: MAGKLMHALQ YNSYGGGAAG LEHVQVPVPT PKSNEVCLKL EATSLNPVDW KIQKGMIRPF LPRKFPCIPA TDVAGEVVEV GSGVKNFKAG DKVVAVLSHL
101: GGGGLAEFAV ATEKLTVKRP QEVGAAEAAA LPVAGLTALQ ALTNPAGLKL DGTGKKANIL VTAASGGVGH YAVQLAKLAN AHVTATCGAR NIEFVKSLGA
201: DEVLDYKTPE GAALKSPSGK KYDAVVHCAN GIPFSVFEPN LSENGKVIDI TPGPNAMWTY AVKKITMSKK QLVPLLLIPK AENLEFMVNL VKEGKVKTVI
301: DSKHPLSKAE DAWAKSIDGH ATGKIIVEP
101: GGGGLAEFAV ATEKLTVKRP QEVGAAEAAA LPVAGLTALQ ALTNPAGLKL DGTGKKANIL VTAASGGVGH YAVQLAKLAN AHVTATCGAR NIEFVKSLGA
201: DEVLDYKTPE GAALKSPSGK KYDAVVHCAN GIPFSVFEPN LSENGKVIDI TPGPNAMWTY AVKKITMSKK QLVPLLLIPK AENLEFMVNL VKEGKVKTVI
301: DSKHPLSKAE DAWAKSIDGH ATGKIIVEP
Arabidopsis Description
CEQORHChloroplast envelope quinone oxidoreductase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9SV68]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.