Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS3A01G099400.1 | |
| TraesCS3B01G115800.1 | |
| TraesCS3D01G099700.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G56460.1 | TraesCS3A01G099400.1 | AT2G01950.1 | 19000166 |
| AT3G56460.1 | TraesCS3B01G115800.1 | AT2G01950.1 | 19000166 |
| AT3G56460.1 | TraesCS3D01G099700.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G246800.1 | Wheat | peroxisome | 98.84 | 98.84 |
| TraesCS6D01G229000.1 | Wheat | peroxisome | 98.55 | 98.55 |
| HORVU6Hr1G063770.1 | Barley | peroxisome | 97.11 | 97.11 |
| Os05t0313500-01 | Rice | peroxisome, plastid | 83.53 | 86.27 |
| EES12890 | Sorghum | plastid | 86.13 | 86.13 |
| Zm00001d002246_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome | 86.99 | 86.0 |
| Solyc03g095360.2.1 | Tomato | plastid | 72.25 | 71.84 |
| GSMUA_AchrUn_... | Banana | plastid | 69.65 | 69.25 |
| VIT_13s0067g00160.t01 | Wine grape | peroxisome | 68.21 | 68.41 |
| AT3G56460.1 | Thale cress | cytosol | 68.79 | 68.39 |
| CDX67648 | Canola | extracellular | 44.22 | 68.3 |
| KRH64241 | Soybean | nucleus | 67.05 | 67.05 |
| CDY32016 | Canola | peroxisome | 67.05 | 66.67 |
| KRH53690 | Soybean | cytosol, peroxisome, plasma membrane | 66.76 | 66.57 |
| Solyc03g095320.1.1 | Tomato | cytosol, plastid | 16.76 | 65.91 |
| Bra003241.1-P | Field mustard | cytosol | 67.05 | 49.68 |
| TraesCS3B01G548400.1 | Wheat | cytosol, peroxisome, plastid | 17.63 | 27.98 |
| TraesCS6B01G411600.1 | Wheat | peroxisome | 24.86 | 26.3 |
| TraesCS6B01G411700.1 | Wheat | cytosol | 24.28 | 25.69 |
| TraesCS6B01G161600.1 | Wheat | plastid | 27.46 | 24.8 |
| TraesCS2B01G295300.1 | Wheat | golgi | 23.7 | 24.48 |
| TraesCS5B01G279700.1 | Wheat | plastid | 23.7 | 24.05 |
| TraesCS2B01G295200.1 | Wheat | plastid | 22.54 | 23.71 |
| TraesCS2B01G295100.1 | Wheat | plastid | 22.25 | 23.69 |
| TraesCS4B01G371900.1 | Wheat | mitochondrion, plastid | 26.3 | 23.51 |
| TraesCS3B01G326600.1 | Wheat | mitochondrion | 24.57 | 23.42 |
| TraesCS5B01G279900.1 | Wheat | golgi | 22.25 | 22.92 |
| TraesCS7B01G043400.1 | Wheat | cytosol, peroxisome, plastid | 21.97 | 22.62 |
Protein Annotations
| Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | MapMan:50.1.3 | InterPro:ADH_C | InterPro:ADH_N | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005777 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0016491 | GO:GO:0055114 |
| InterPro:GroES-like_sf | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00107 | PFAM:PF08240 | InterPro:PKS_ER | ScanProsite:PS01162 |
| PANTHER:PTHR43677 | PANTHER:PTHR43677:SF4 | InterPro:Quin_OxRdtase/zeta-crystal_CS | SMART:SM00829 | SUPFAM:SSF50129 | SUPFAM:SSF51735 |
| EnsemblPlantsGene:TraesCS6B01G277800 | EnsemblPlants:TraesCS6B01G277800.1 | TIGR:cd08241 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr6B:-:502726049..502730253
Molecular Weight (calculated)
36455.4 Da
IEP (calculated)
9.601
GRAVY (calculated)
0.282
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MEALVVRKLG DPTLPPGGED SPFAAVSGDR PIPELSSPTS VRVRVAATSL NFATFLQVQG KYQERPPLPY VPGSDYAGVV DAVGPGVRRF RPGDRVCSLA
101: SVGSFAEFVV ADEKALYAVP DGCDLVAAGA LPVAFGTSHL ALAHRAQLKA GQVLLVLGAA GGVGVSAVQI GKVCGAIVIA VARGVEKLQY LKSIGADHVI
201: DSSKENVIES AKSFLKTSGL KGVDVLYDPV GGKLTQDSLK LLNWGAHILL IGFASGDVPV IRANIALIKN WTIHGLYWGS YLTHRPAVLI DSLNELLSWL
301: SKGLITVKLS QTYRLAEAHL AFADLRDRKA VGKVMIVMGS SAKSRL
101: SVGSFAEFVV ADEKALYAVP DGCDLVAAGA LPVAFGTSHL ALAHRAQLKA GQVLLVLGAA GGVGVSAVQI GKVCGAIVIA VARGVEKLQY LKSIGADHVI
201: DSSKENVIES AKSFLKTSGL KGVDVLYDPV GGKLTQDSLK LLNWGAHILL IGFASGDVPV IRANIALIKN WTIHGLYWGS YLTHRPAVLI DSLNELLSWL
301: SKGLITVKLS QTYRLAEAHL AFADLRDRKA VGKVMIVMGS SAKSRL
001: MEALVCRKLG DPTATNPGSP ESPVEVSKTH PIPSLNSDTS VRVRVIATSL NYANYLQILG KYQEKPPLPF IPGSDYSGIV DAIGPAVTKF RVGDRVCSFA
101: DLGSFAQFIV ADQSRLFLVP ERCDMVAAAA LPVAFGTSHV ALVHRARLTS GQVLLVLGAA GGVGLAAVQI GKVCGAIVIA VARGTEKIQL LKSMGVDHVV
201: DLGTENVISS VKEFIKTRKL KGVDVLYDPV GGKLTKESMK VLKWGAQILV IGFASGEIPV IPANIALVKN WTVHGLYWGS YRIHQPNVLE DSIKELLSWL
301: SRGLITIHIS HTYSLSQANL AFGDLKDRKA IGKVMIALDH KTALSSKL
101: DLGSFAQFIV ADQSRLFLVP ERCDMVAAAA LPVAFGTSHV ALVHRARLTS GQVLLVLGAA GGVGLAAVQI GKVCGAIVIA VARGTEKIQL LKSMGVDHVV
201: DLGTENVISS VKEFIKTRKL KGVDVLYDPV GGKLTKESMK VLKWGAQILV IGFASGEIPV IPANIALVKN WTVHGLYWGS YRIHQPNVLE DSIKELLSWL
301: SRGLITIHIS HTYSLSQANL AFGDLKDRKA IGKVMIALDH KTALSSKL
Arabidopsis Description
GroES-like zinc-binding alcohol dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LXZ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.