Factsheet for TraesCS3B01G548400.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G494500.1	Wheat	cytosol, peroxisome, plastid	94.04	62.31
TraesCS2B01G295100.1	Wheat	plastid	84.4	56.62
TraesCS2B01G295200.1	Wheat	plastid	81.65	54.1
GSMUA_Achr2P06100_001	Banana	mitochondrion	55.96	49.8
Os04t0359100-01	Rice	plasma membrane	72.94	47.89
GSMUA_Achr6P27730_001	Banana	cytosol	54.59	47.04
Os04t0358000-01	Rice	endoplasmic reticulum	67.89	46.69
GSMUA_Achr2P06110_001	Banana	mitochondrion	65.6	42.94
PGSC0003DMT400062565	Potato	cytosol, peroxisome, plastid	64.22	42.55
Bra001207.1-P	Field mustard	cytosol	63.76	42.25
Solyc09g059040.2.1	Tomato	plastid	63.76	42.25
Solyc09g059030.2.1	Tomato	plastid	63.76	42.25
PGSC0003DMT400044064	Potato	cytosol	63.76	42.25
CDY34537	Canola	cytosol	63.76	42.25
CDX80695	Canola	cytosol	63.76	42.25
Os04t0359700-00	Rice	cytosol, mitochondrion, peroxisome, plastid	68.35	41.27
AT4G13010.1	Thale cress	cytosol	61.47	40.73
KRH23756	Soybean	endoplasmic reticulum	61.01	40.55
TraesCS2B01G295300.1	Wheat	golgi	61.93	40.3
PGSC0003DMT400022514	Potato	cytosol	60.55	40.0
PGSC0003DMT400044065	Potato	cytosol	60.09	39.46
TraesCS5B01G279900.1	Wheat	golgi	60.55	39.29
KRH46629	Soybean	cytosol	59.17	39.21
KRG99627	Soybean	cytosol	59.17	39.21
VIT_07s0151g00260.t01	Wine grape	cytosol	60.55	39.05
TraesCS7B01G043400.1	Wheat	cytosol, peroxisome, plastid	60.09	38.99
KRH44933	Soybean	cytosol, peroxisome	49.54	36.24
VIT_07s0151g00090.t01	Wine grape	mitochondrion	63.3	36.03
Solyc09g059020.2.1	Tomato	cytosol, extracellular, peroxisome	44.5	35.4
TraesCS5B01G279700.1	Wheat	plastid	54.59	34.9
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	37.61	33.06
PGSC0003DMT400090732	Potato	plastid	29.82	29.55
TraesCS6B01G411600.1	Wheat	peroxisome	33.03	22.02
TraesCS6B01G411700.1	Wheat	cytosol	31.65	21.1
TraesCS6B01G161600.1	Wheat	plastid	34.86	19.84
TraesCS3B01G326600.1	Wheat	mitochondrion	31.19	18.73
TraesCS6B01G277800.1	Wheat	peroxisome	27.98	17.63
TraesCS4B01G371900.1	Wheat	mitochondrion, plastid	23.85	13.44

Protein Annotations

EnsemblPlants:TraesCS3B01G548400.1	EnsemblPlantsGene:TraesCS3B01G548400	Gene3D:3.40.50.720	Gene3D:3.90.180.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:ADH_N	InterPro:GroES-like_sf
InterPro:NAD(P)-bd_dom_sf	InterPro:PKS_ER	PANTHER:PTHR44013	PANTHER:PTHR44013:SF4	PFAM:PF08240	SEG:seg
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	TIGR:cd08267	MapMan:35.1	:

Description

No Description!

Coordinates

chr3B:+:783872250..783873947

Molecular Weight (calculated)

22401.0 Da

IEP (calculated)

8.177

GRAVY (calculated)

0.272

Length

218 amino acids

Sequence
(BLAST)

001: MRAVQYTGYG GGAAALKYVD IPVPSPKKDE VLIKIEAASI NPADWNIQKG LIRPFVPKFP FIPVTDVAGE VVEVGPAVQE LKVGDKVVSK LVFWKSGGLA
101: EYVAASESIT VACPAGISAA DAAGLPLAGF TALQALRAIG TKFDGTGSSS NILITAGSGG IGTYAVQLAK LGNHNVTATC GARNLEVVAN IGADEVLDYK
201: TLEGAALKIL RARSTTTS

Best Arabidopsis Sequence Match ( AT4G13010.1 )
(BLAST)

001: MAGKLMHALQ YNSYGGGAAG LEHVQVPVPT PKSNEVCLKL EATSLNPVDW KIQKGMIRPF LPRKFPCIPA TDVAGEVVEV GSGVKNFKAG DKVVAVLSHL
101: GGGGLAEFAV ATEKLTVKRP QEVGAAEAAA LPVAGLTALQ ALTNPAGLKL DGTGKKANIL VTAASGGVGH YAVQLAKLAN AHVTATCGAR NIEFVKSLGA
201: DEVLDYKTPE GAALKSPSGK KYDAVVHCAN GIPFSVFEPN LSENGKVIDI TPGPNAMWTY AVKKITMSKK QLVPLLLIPK AENLEFMVNL VKEGKVKTVI
301: DSKHPLSKAE DAWAKSIDGH ATGKIIVEP

Arabidopsis Description

CEQORHChloroplast envelope quinone oxidoreductase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9SV68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.