Factsheet for TraesCS5B01G279900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 2
peroxisome 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G287700.1	Wheat	golgi	98.21	98.21
TraesCS5A01G280800.1	Wheat	cytosol, peroxisome, plastid	97.92	97.92
HORVU5Hr1G075550.8	Barley	vacuole	95.54	95.54
OQU89739	Sorghum	cytosol	80.36	79.18
Zm00001d021025_P001	Maize	mitochondrion, peroxisome, plastid	79.46	77.17
Os09t0503100-01	Rice	plasma membrane	77.38	75.14
Solyc09g059030.2.1	Tomato	plastid	64.29	65.65
PGSC0003DMT400062565	Potato	cytosol, peroxisome, plastid	63.69	65.05
TraesCS5B01G279700.1	Wheat	plastid	64.58	63.64
TraesCS2B01G295300.1	Wheat	golgi	62.5	62.69
PGSC0003DMT400044064	Potato	cytosol	61.31	62.61
Solyc09g059040.2.1	Tomato	plastid	61.01	62.31
Bra001207.1-P	Field mustard	cytosol	60.12	61.4
AT4G13010.1	Thale cress	cytosol	60.12	61.4
CDX80695	Canola	cytosol	60.12	61.4
CDY34537	Canola	cytosol	60.12	61.4
TraesCS3B01G548400.1	Wheat	cytosol, peroxisome, plastid	39.29	60.55
KRH23756	Soybean	endoplasmic reticulum	58.93	60.37
KRG99627	Soybean	cytosol	58.93	60.18
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	43.75	59.27
Solyc09g059020.2.1	Tomato	cytosol, extracellular, peroxisome	48.21	59.12
KRH46629	Soybean	cytosol	57.74	58.97
TraesCS7B01G043400.1	Wheat	cytosol, peroxisome, plastid	58.93	58.93
PGSC0003DMT400022514	Potato	cytosol	57.74	58.79
PGSC0003DMT400044065	Potato	cytosol	57.74	58.43
VIT_07s0151g00260.t01	Wine grape	cytosol	58.04	57.69
KRH44933	Soybean	cytosol, peroxisome	49.4	55.7
TraesCS2B01G295100.1	Wheat	plastid	52.68	54.46
TraesCS2B01G295200.1	Wheat	plastid	53.27	54.41
VIT_07s0151g00090.t01	Wine grape	mitochondrion	61.9	54.31
PGSC0003DMT400090732	Potato	plastid	22.92	35.0
TraesCS6B01G411700.1	Wheat	cytosol	27.98	28.75
TraesCS6B01G411600.1	Wheat	peroxisome	27.38	28.13
TraesCS3B01G326600.1	Wheat	mitochondrion	28.87	26.72
TraesCS6B01G161600.1	Wheat	plastid	28.27	24.8
TraesCS6B01G277800.1	Wheat	peroxisome	22.92	22.25
TraesCS4B01G371900.1	Wheat	mitochondrion, plastid	23.81	20.67

Protein Annotations

EnsemblPlants:TraesCS5B01G279900.1	EnsemblPlantsGene:TraesCS5B01G279900	Gene3D:3.40.50.720	Gene3D:3.90.180.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:ADH_N	InterPro:GroES-like_sf
InterPro:NAD(P)-bd_dom_sf	InterPro:PKS_ER	PANTHER:PTHR44013	PANTHER:PTHR44013:SF3	PFAM:PF08240	PFAM:PF13602
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	TIGR:cd08267	MapMan:35.1	:

Description

No Description!

Coordinates

chr5B:+:465823984..465825636

Molecular Weight (calculated)

34697.0 Da

IEP (calculated)

9.540

GRAVY (calculated)

0.038

Length

336 amino acids

Sequence
(BLAST)

001: MATPRTMRAV QYDKYGGGAE GLKHVEVPVP SPKKGEVLLK MEAASINPID WKIQKGMLRP FLPGKFPFTP VGDLAGEVVE LGSGVTNFKP GDKVISISFP
101: SGGGLAEYAV APASLTVARP TELSAVEGAC LPAAGGSALQ LLKLAGVSFD GTSGATGPKN ALVTAASGGV GHYAVQLAKL AGLHVTATCG ARNVDFVRGL
201: GADEVLDYRT PEGAALRSPS GRRYDAVANC AAGVPWPALK AVLADEGGTV ADVTPGVGAA LTSILQKATF AKKRLAPLML APRREEMEWL VGLARQGKLR
301: TTVDSRFPLS RAQEAWAKSM EGHATGKIVV EMGGAE

Best Arabidopsis Sequence Match ( AT4G13010.1 )
(BLAST)

001: MAGKLMHALQ YNSYGGGAAG LEHVQVPVPT PKSNEVCLKL EATSLNPVDW KIQKGMIRPF LPRKFPCIPA TDVAGEVVEV GSGVKNFKAG DKVVAVLSHL
101: GGGGLAEFAV ATEKLTVKRP QEVGAAEAAA LPVAGLTALQ ALTNPAGLKL DGTGKKANIL VTAASGGVGH YAVQLAKLAN AHVTATCGAR NIEFVKSLGA
201: DEVLDYKTPE GAALKSPSGK KYDAVVHCAN GIPFSVFEPN LSENGKVIDI TPGPNAMWTY AVKKITMSKK QLVPLLLIPK AENLEFMVNL VKEGKVKTVI
301: DSKHPLSKAE DAWAKSIDGH ATGKIIVEP

Arabidopsis Description

CEQORHChloroplast envelope quinone oxidoreductase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9SV68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.