Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G287700.1 | Wheat | golgi | 98.21 | 98.21 |
| TraesCS5B01G279900.1 | Wheat | golgi | 97.92 | 97.92 |
| HORVU5Hr1G075550.8 | Barley | vacuole | 94.64 | 94.64 |
| OQU89739 | Sorghum | cytosol | 81.25 | 80.06 |
| Zm00001d021025_P001 | Maize | mitochondrion, peroxisome, plastid | 80.36 | 78.03 |
| Os09t0503100-01 | Rice | plasma membrane | 78.27 | 76.01 |
| Solyc09g059030.2.1 | Tomato | plastid | 64.58 | 65.96 |
| TraesCS5A01G280700.1 | Wheat | plastid | 66.96 | 65.6 |
| PGSC0003DMT400062565 | Potato | cytosol, peroxisome, plastid | 63.99 | 65.35 |
| TraesCS2A01G277900.1 | Wheat | golgi | 62.8 | 62.99 |
| PGSC0003DMT400044064 | Potato | cytosol | 61.61 | 62.92 |
| Solyc09g059040.2.1 | Tomato | plastid | 61.01 | 62.31 |
| AT4G13010.1 | Thale cress | cytosol | 61.01 | 62.31 |
| Bra001207.1-P | Field mustard | cytosol | 61.01 | 62.31 |
| CDX80695 | Canola | cytosol | 61.01 | 62.31 |
| CDY34537 | Canola | cytosol | 61.01 | 62.31 |
| KRG99627 | Soybean | cytosol | 59.23 | 60.49 |
| VIT_07s0151g00200.t01 | Wine grape | cytosol, mitochondrion, plastid | 44.64 | 60.48 |
| TraesCS2A01G277700.1 | Wheat | plastid | 40.48 | 60.18 |
| KRH23756 | Soybean | endoplasmic reticulum | 58.63 | 60.06 |
| PGSC0003DMT400022514 | Potato | cytosol | 58.63 | 59.7 |
| Solyc09g059020.2.1 | Tomato | cytosol, extracellular, peroxisome | 48.51 | 59.49 |
| KRH46629 | Soybean | cytosol | 58.04 | 59.27 |
| PGSC0003DMT400044065 | Potato | cytosol | 58.33 | 59.04 |
| VIT_07s0151g00260.t01 | Wine grape | cytosol | 59.23 | 58.88 |
| TraesCS5A01G014100.1 | Wheat | plastid | 56.85 | 56.85 |
| TraesCS7A01G142200.1 | Wheat | cytosol, peroxisome, plastid | 47.62 | 55.56 |
| KRH44933 | Soybean | cytosol, peroxisome | 49.11 | 55.37 |
| VIT_07s0151g00090.t01 | Wine grape | mitochondrion | 62.8 | 55.09 |
| PGSC0003DMT400090732 | Potato | plastid | 22.92 | 35.0 |
| TraesCS6A01G373900.1 | Wheat | golgi | 26.79 | 27.52 |
| TraesCS6A01G374000.1 | Wheat | cytosol | 25.6 | 26.63 |
| TraesCS3A01G292000.1 | Wheat | mitochondrion | 27.68 | 25.62 |
| TraesCS6A01G133100.1 | Wheat | plastid | 27.68 | 24.28 |
| TraesCS6A01G246800.1 | Wheat | peroxisome | 22.62 | 21.97 |
| TraesCS5A01G542400.1 | Wheat | plastid | 24.7 | 21.96 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G280800.1 | EnsemblPlantsGene:TraesCS5A01G280800 | Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:ADH_N | InterPro:GroES-like_sf |
| InterPro:NAD(P)-bd_dom_sf | InterPro:PKS_ER | PANTHER:PTHR44013 | PANTHER:PTHR44013:SF3 | PFAM:PF08240 | PFAM:PF13602 |
| SMART:SM00829 | SUPFAM:SSF50129 | SUPFAM:SSF51735 | TIGR:cd08267 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5A:+:489933114..489934844
Molecular Weight (calculated)
34599.9 Da
IEP (calculated)
9.326
GRAVY (calculated)
0.032
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPRTMRAV QYDKYGGGAE GLKHVEVPVP SPKKGEVLLK MEAASINPID WKIQKGMLRP FLPGKFPFTP VGDLAGEVVE LGSGVTNFKP GDKVISISFP
101: SGGGLAEYAV APASLTVARP PEVSAVEGAC LPAAGGSALQ LLKLAGVSFD GTSGTTGPKN VLVTAASGGV GHYAVQLAKL AGLHVTATCG ARNVDFVRGL
201: GADEVLDYGT PEGAALRSPS GRRYDAVANC AAGVPWPALK AVLADEGGTV ADVTPGVGAA LTSILQKATF AKKRLAPLML APKREEMEWL VGLARQGKLR
301: TTVDSRHPLS RAQEAWAKSM EGHATGKIVV EMGGAE
101: SGGGLAEYAV APASLTVARP PEVSAVEGAC LPAAGGSALQ LLKLAGVSFD GTSGTTGPKN VLVTAASGGV GHYAVQLAKL AGLHVTATCG ARNVDFVRGL
201: GADEVLDYGT PEGAALRSPS GRRYDAVANC AAGVPWPALK AVLADEGGTV ADVTPGVGAA LTSILQKATF AKKRLAPLML APKREEMEWL VGLARQGKLR
301: TTVDSRHPLS RAQEAWAKSM EGHATGKIVV EMGGAE
001: MAGKLMHALQ YNSYGGGAAG LEHVQVPVPT PKSNEVCLKL EATSLNPVDW KIQKGMIRPF LPRKFPCIPA TDVAGEVVEV GSGVKNFKAG DKVVAVLSHL
101: GGGGLAEFAV ATEKLTVKRP QEVGAAEAAA LPVAGLTALQ ALTNPAGLKL DGTGKKANIL VTAASGGVGH YAVQLAKLAN AHVTATCGAR NIEFVKSLGA
201: DEVLDYKTPE GAALKSPSGK KYDAVVHCAN GIPFSVFEPN LSENGKVIDI TPGPNAMWTY AVKKITMSKK QLVPLLLIPK AENLEFMVNL VKEGKVKTVI
301: DSKHPLSKAE DAWAKSIDGH ATGKIIVEP
101: GGGGLAEFAV ATEKLTVKRP QEVGAAEAAA LPVAGLTALQ ALTNPAGLKL DGTGKKANIL VTAASGGVGH YAVQLAKLAN AHVTATCGAR NIEFVKSLGA
201: DEVLDYKTPE GAALKSPSGK KYDAVVHCAN GIPFSVFEPN LSENGKVIDI TPGPNAMWTY AVKKITMSKK QLVPLLLIPK AENLEFMVNL VKEGKVKTVI
301: DSKHPLSKAE DAWAKSIDGH ATGKIIVEP
Arabidopsis Description
CEQORHChloroplast envelope quinone oxidoreductase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9SV68]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.