Factsheet for TraesCS5A01G542400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G365600.1	Wheat	plastid	96.3	95.29
TraesCS4B01G371900.1	Wheat	mitochondrion, plastid	95.77	93.54
HORVU4Hr1G088610.1	Barley	plastid	89.15	89.39
Os03t0101600-01	Rice	plasma membrane	71.69	78.55
Zm00001d027276_P001	Maize	extracellular	74.87	76.08
PGSC0003DMT400055608	Potato	cytosol, peroxisome, plastid	65.08	75.23
KXG40429	Sorghum	plastid	75.93	74.74
VIT_09s0002g08480.t01	Wine grape	cytosol	65.34	74.62
CDY16814	Canola	cytosol	17.46	73.33
Bra035926.1-P	Field mustard	cytosol	62.7	73.15
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane, vacuole	55.03	72.47
CDX87218	Canola	cytosol	16.93	71.11
VIT_09s0002g08470.t01	Wine grape	cytosol	61.9	70.27
KRH27530	Soybean	nucleus	65.61	65.96
Solyc06g034120.2.1	Tomato	extracellular	66.14	65.1
AT5G61510.1	Thale cress	plastid	64.81	60.34
CDY68244	Canola	mitochondrion	27.51	57.14
CDY72063	Canola	plastid	28.57	51.43
TraesCS6A01G374000.1	Wheat	cytosol	27.25	31.89
TraesCS6A01G373900.1	Wheat	golgi	26.98	31.19
TraesCS6A01G246800.1	Wheat	peroxisome	24.34	26.59
TraesCS5A01G280800.1	Wheat	cytosol, peroxisome, plastid	21.96	24.7
TraesCS2A01G277700.1	Wheat	plastid	14.02	23.45
TraesCS5A01G280700.1	Wheat	plastid	20.9	23.03
TraesCS2A01G277900.1	Wheat	golgi	19.84	22.39
TraesCS6A01G133100.1	Wheat	plastid	21.69	21.41
TraesCS5A01G014100.1	Wheat	plastid	18.78	21.13
TraesCS3A01G292000.1	Wheat	mitochondrion	19.05	19.83
TraesCS7A01G142200.1	Wheat	cytosol, peroxisome, plastid	14.55	19.1

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	InterPro:ADH_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009644	GO:GO:0016491	GO:GO:0055114
InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	PANTHER:PTHR42975
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	EnsemblPlantsGene:TraesCS5A01G542400	EnsemblPlants:TraesCS5A01G542400.1	TIGR:cd05286
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:698498269..698501511

Molecular Weight (calculated)

40051.2 Da

IEP (calculated)

8.572

GRAVY (calculated)

0.038

Length

378 amino acids

Sequence
(BLAST)

001: MTSTPRSTRL AAFQSVSFSP SPAATPVAFT PRRSNSHPAA RLRLRCCCST GDPAAMVKAI RVHELGGPEA LRWEEVEVGE PGDGEIRIRN TAIGVNFIDV
101: YFRKGVYPAP LPFTPGMEAV GVVTAVGPGL TGRKVGDVVA YAGKPMGSYA EEQIIPADVA VPVPPSVNHK TAAAIMLKGM TVHMLVRRIF KVETGHTVLV
201: HAAAGGVGSL LCQWANALGA TVIGTVSNEE KASHAHFDGC HHVIIYTKED VATRVKEITG GKGVNVVYDS VGKDTYKASL ECLAYRGFLV SFGQSSGSPD
301: PISMGDLAAK SLFLTRPSVM HYTGTRDELL EVAGEVFANV ANGVLHTRVK HTYPLSEAAR AHADLEARKT SGSVLLIP

Best Arabidopsis Sequence Match ( AT5G61510.1 )
(BLAST)

001: MAALTLHHHH HHRHHSCLQA SGHLSRRLYH RIFSSFPRNP VKDLNFRLSL ADFSSFSLST RGTVFAVRAL STVAVEESSE KKMVKGIRVY EHGGPEVLKW
101: EDVEVGEPKE GEIRVKNKAI GLNFIDVYFR KGVYKPASMP FTPGMEAVGE VVAVGSGLTG RMIGDLVAYA GNPMGAYAEE QILPADKVVP VPSSIDPIVA
201: ASIMLKGMTA QFLLRRCFKV EPGHTILVHA AAGGVGSLLC QWANALGATV IGTVSTNEKA AQAKEDGCHH VIMYKNEDFV SRVNDITSGK GVNVVYDSVG
301: KDTFKGSLAC LKSRGYMVSF GQSSGSPDPI PLSDLAPKSL FLTRPSMMHY NETRDELLEC AGEVFANVTS GILKARVNHK YPLSRVADAH ADLENRITSG
401: SVVLLP

Arabidopsis Description

At5g61510 [Source:UniProtKB/TrEMBL;Acc:A1L4Y4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.