CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027276_P001	Maize	extracellular	88.8	91.67
Os03t0101600-01	Rice	plasma membrane	72.4	80.58
PGSC0003DMT400055608	Potato	cytosol, peroxisome, plastid	65.1	76.45
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane, vacuole	56.77	75.96
TraesCS5A01G542400.1	Wheat	plastid	74.74	75.93
CDY16814	Canola	cytosol	17.71	75.56
VIT_09s0002g08480.t01	Wine grape	cytosol	64.84	75.23
HORVU4Hr1G088610.1	Barley	plastid	73.7	75.07
TraesCS4D01G365600.1	Wheat	plastid	74.48	74.87
TraesCS4B01G371900.1	Wheat	mitochondrion, plastid	74.48	73.9
CDX87218	Canola	cytosol	17.19	73.33
Bra035926.1-P	Field mustard	cytosol	61.46	72.84
VIT_09s0002g08470.t01	Wine grape	cytosol	62.24	71.77
KRH27530	Soybean	nucleus	65.62	67.02
Solyc06g034120.2.1	Tomato	extracellular	66.15	66.15
AT5G61510.1	Thale cress	plastid	63.8	60.34
CDY68244	Canola	mitochondrion	25.52	53.85
CDY72063	Canola	plastid	26.82	49.05
OQU85913	Sorghum	cytosol	25.26	29.57
OQU89739	Sorghum	cytosol	22.4	25.22
EES12890	Sorghum	plastid	22.66	25.14
EER97004	Sorghum	cytosol, peroxisome, plastid	20.57	23.17
EES10573	Sorghum	plastid	20.57	22.97
OQU83589	Sorghum	cytosol	18.75	22.71
KXG25078	Sorghum	plastid	20.31	19.5
KXG33382	Sorghum	plastid	20.83	19.09

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	UniProt:A0A1B6QR86	InterPro:ADH_C	InterPro:ADH_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009644	GO:GO:0016491
GO:GO:0055114	InterPro:GroES-like_sf	EnsemblPlants:KXG40429	ProteinID:KXG40429	ProteinID:KXG40429.1	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	PANTHER:PTHR42975	SMART:SM00829	EnsemblPlantsGene:SORBI_3001G543300
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI00081ABB51	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:80704810..80706939

Molecular Weight (calculated)

40684.0 Da

IEP (calculated)

8.372

GRAVY (calculated)

0.035

Length

384 amino acids

Sequence
(BLAST)

001: MTHSPCSSIV FARFFGQPLL PIPTPSRLGT GERKTQTPST LRLRCHRRDA ASVAMVKSKA IRVHELGGPE VLRWEEVEVG EPGEGEIRIR TTAVGVNFID
101: IYFRKGVYAA PTLPFTPGME AVGVVTAVGP GLTGRKVGDV VAYAGNPMGS YAQEQILPAA VAVPIPPSVD HKQAASVMLK GMTAHVLLRR VFKVENGHTV
201: LVHAAAGGVG SLLCQWANAL GATVIGTVSN QDKAAQAAQD GCHHPIIYTS EDVVARVKEI TSGKGVNVVY DSVGKDTYKA SLECLAPCGF LVSFGQSSGK
301: PDPIPMSDLA SKSLFLTRPS LMHYTATRDE LLESAGEVFA NVANGVLRVR VNHTYPLSEA AQAHADLEGR KTSGSIVLIP DTVS

Best Arabidopsis Sequence Match ( AT5G61510.1 )
(BLAST)

001: MAALTLHHHH HHRHHSCLQA SGHLSRRLYH RIFSSFPRNP VKDLNFRLSL ADFSSFSLST RGTVFAVRAL STVAVEESSE KKMVKGIRVY EHGGPEVLKW
101: EDVEVGEPKE GEIRVKNKAI GLNFIDVYFR KGVYKPASMP FTPGMEAVGE VVAVGSGLTG RMIGDLVAYA GNPMGAYAEE QILPADKVVP VPSSIDPIVA
201: ASIMLKGMTA QFLLRRCFKV EPGHTILVHA AAGGVGSLLC QWANALGATV IGTVSTNEKA AQAKEDGCHH VIMYKNEDFV SRVNDITSGK GVNVVYDSVG
301: KDTFKGSLAC LKSRGYMVSF GQSSGSPDPI PLSDLAPKSL FLTRPSMMHY NETRDELLEC AGEVFANVTS GILKARVNHK YPLSRVADAH ADLENRITSG
401: SVVLLP

Arabidopsis Description

At5g61510 [Source:UniProtKB/TrEMBL;Acc:A1L4Y4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.