CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032332_P001	Maize	plastid	86.75	89.9
HORVU6Hr1G025630.2	Barley	cytosol	55.75	85.44
Os08t0379400-02	Rice	plastid	75.25	77.18
GSMUA_Achr4P07780_001	Banana	cytosol	59.0	76.38
TraesCS6B01G161600.1	Wheat	plastid	72.25	75.46
TraesCS6D01G122800.1	Wheat	plastid	71.75	74.93
TraesCS6A01G133100.1	Wheat	plastid	70.5	73.63
VIT_01s0127g00740.t01	Wine grape	plastid	65.5	69.5
HORVU6Hr1G025730.2	Barley	plastid	72.25	68.32
Solyc05g005480.2.1	Tomato	plastid	65.25	67.27
CDY47631	Canola	plastid	64.0	66.49
PGSC0003DMT400079606	Potato	cytosol	64.0	65.98
Bra024616.1-P	Field mustard	plastid	63.5	65.97
CDY61544	Canola	plastid	63.5	65.97
AT1G23740.1	Thale cress	plastid	63.0	65.28
KRH56616	Soybean	cytosol	17.25	64.49
KRG93309	Soybean	cytosol	50.75	63.44
KRH45668	Soybean	nucleus	62.75	63.22
KRG99340	Soybean	plastid	62.0	62.78
KRH07194	Soybean	nucleus	49.25	61.76
KRG93310	Soybean	cytosol	49.25	61.56
KRG93311	Soybean	cytosol	49.25	61.18
KRG93306	Soybean	cytosol	47.5	59.01
KRG93308	Soybean	extracellular	20.75	46.89
EES10573	Sorghum	plastid	25.75	29.94
OQU83589	Sorghum	cytosol	23.25	29.34
EES12890	Sorghum	plastid	25.25	29.19
OQU89739	Sorghum	cytosol	24.75	29.03
EER97004	Sorghum	cytosol, peroxisome, plastid	23.25	27.27
OQU85913	Sorghum	cytosol	21.5	26.22
KXG33382	Sorghum	plastid	25.5	24.34
KXG40429	Sorghum	plastid	19.5	20.31

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	UniProt:A0A1B6PHC9	InterPro:ADH_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009409
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009628	GO:GO:0009941
GO:GO:0010319	GO:GO:0016491	GO:GO:0035671	GO:GO:0035798	GO:GO:0048046	GO:GO:0055114
InterPro:GroES-like_sf	EnsemblPlants:KXG25078	ProteinID:KXG25078	ProteinID:KXG25078.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF08240
PFAM:PF13602	InterPro:PKS_ER	ScanProsite:PS01162	PANTHER:PTHR44573	InterPro:Quin_OxRdtase/zeta-crystal_CS	SMART:SM00829
EnsemblPlantsGene:SORBI_3007G116700	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0003C64828	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:-:50480800..50482321

Molecular Weight (calculated)

41001.1 Da

IEP (calculated)

8.771

GRAVY (calculated)

0.099

Length

400 amino acids

Sequence
(BLAST)

001: MQAFLSSSIP ATSYSRSSLF LPQPPHQAPV KLVFPSSAPQ RGSGAVAADA AARTRRTASE AAGRSGRCVA ASSSSSSPAT AAVATTEVPG VMKAWVYDAY
101: GDASVLKLDE AAAVPALADD QVLVKVVAGA LNPVDAKRRA GKFQATDSPL PTVPGYDMAG VVVKVGSQVK NLKEGDEVYG MISEKPLDGP KQSGSLAEYT
201: AVEEKLLALK PKVLDFAQAA SLPLAVQTAN GGLDRAGLSA GKSVLVLGGA GGVGSLAIQL AKHVYGASKV AATASTKKIE LLKSLGVDVA IDYTKDSFEE
301: LTDKYDVVLD AVGQGDKAVK VVKEGGSVVV LTGAVSPPGF RFVVTSNGAV LEKLNPYLES GKVKPLIDPE GPFAFSQVVE AFSYLETGRA TGKVVISPIP

Best Arabidopsis Sequence Match ( AT1G23740.1 )
(BLAST)

001: MNAALATTTA TTPVLRRETP LLHYCSLTTK SPVYQINRVR FGSCVQTVSK KFLKISASSQ SASAAVNVTA DASIPKEMKA WVYSDYGGVD VLKLESNIVV
101: PEIKEDQVLI KVVAAALNPV DAKRRQGKFK ATDSPLPTVP GYDVAGVVVK VGSAVKDLKE GDEVYANVSE KALEGPKQFG SLAEYTAVEE KLLALKPKNI
201: DFAQAAGLPL AIETADEGLV RTEFSAGKSI LVLNGAGGVG SLVIQLAKHV YGASKVAATA STEKLELVRS LGADLAIDYT KENIEDLPDK YDVVFDAIGM
301: CDKAVKVIKE GGKVVALTGA VTPPGFRFVV TSNGDVLKKL NPYIESGKVK PVVDPKGPFP FSRVADAFSY LETNHATGKV VVYPIP

Arabidopsis Description

AORNADPH-dependent alkenal/one oxidoreductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUC1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.