Factsheet for Bra024616.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61544	Canola	plastid	98.18	98.18
CDY47631	Canola	plastid	97.92	97.92
AT1G23740.1	Thale cress	plastid	90.39	90.16
HORVU6Hr1G025630.2	Barley	cytosol	54.55	80.46
VIT_01s0127g00740.t01	Wine grape	plastid	71.17	72.68
Solyc05g005480.2.1	Tomato	plastid	69.87	69.33
KRH45668	Soybean	nucleus	71.17	69.02
KRG99340	Soybean	plastid	70.39	68.61
PGSC0003DMT400079606	Potato	cytosol	68.83	68.3
TraesCS6D01G122800.1	Wheat	plastid	66.75	67.1
Os08t0379400-02	Rice	plastid	67.53	66.67
TraesCS6A01G133100.1	Wheat	plastid	65.97	66.32
TraesCS6B01G161600.1	Wheat	plastid	65.71	66.06
Zm00001d032332_P001	Maize	plastid	65.45	65.28
KXG25078	Sorghum	plastid	65.97	63.5
HORVU6Hr1G025730.2	Barley	plastid	66.23	60.28
Bra001207.1-P	Field mustard	cytosol	27.79	32.52
Bra013540.1-P	Field mustard	cytosol	25.19	29.85
Bra035926.1-P	Field mustard	cytosol	24.42	29.01
Bra027280.1-P	Field mustard	mitochondrion	26.23	27.67
Bra001583.1-P	Field mustard	mitochondrion	24.68	27.14
Bra003241.1-P	Field mustard	cytosol	20.78	17.13

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_N	EnsemblPlantsGene:Bra024616	EnsemblPlants:Bra024616.1
EnsemblPlants:Bra024616.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009409	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579
GO:GO:0009628	GO:GO:0009941	GO:GO:0010319	GO:GO:0016491	GO:GO:0035671	GO:GO:0035798
GO:GO:0048046	GO:GO:0055114	InterPro:GroES-like_sf	UniProt:M4E761	InterPro:NAD(P)-bd_dom_sf	PFAM:PF08240
PFAM:PF13602	InterPro:PKS_ER	ScanProsite:PS01162	PANTHER:PTHR44573	InterPro:Quin_OxRdtase/zeta-crystal_CS	SMART:SM00829
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0002542977	SEG:seg	:	:

Description

AT1G23740 (E=1e-165) | oxidoreductase, zinc-binding dehydrogenase family protein

Coordinates

chrA09:+:24006650..24008299

Molecular Weight (calculated)

40485.7 Da

IEP (calculated)

9.120

GRAVY (calculated)

0.027

Length

385 amino acids

Sequence
(BLAST)

001: MNTALATTTA TTPALRRETP PLRHCSLAKP SVFRLNRVGF KSGVQTIGKS LLRISASNQS ASAAVNVATN ASIPSEMKAW VYGEYGGVDV LKLESNIAVP
101: EVNDDQVLIK VVAAALNPVD AKRRQGKFKA TDSPLPTVPG YDVAGVVVKV GSAVKDFKEG DEVYANVSEK ALEGPKQSGS LAEYTAVEEK LLALKPKNID
201: FAQAAGLPLA IETADEGLVR TEFSAGKSIL VLNGAGGVGS LAIQLAKHVY GASKVAATAS TGKLELVRSL GADLAIDYTK ENIEDLTEKF DVVFDAIGMC
301: DKAVKVIKEG GKVVALTGAV TPPGFRFVVT SNGDVLKKLN PYIESGKVKP VVDPKGPFPF SRVADAFSYL ETNHATGKVV VYPIP

Best Arabidopsis Sequence Match ( AT1G23740.1 )
(BLAST)

001: MNAALATTTA TTPVLRRETP LLHYCSLTTK SPVYQINRVR FGSCVQTVSK KFLKISASSQ SASAAVNVTA DASIPKEMKA WVYSDYGGVD VLKLESNIVV
101: PEIKEDQVLI KVVAAALNPV DAKRRQGKFK ATDSPLPTVP GYDVAGVVVK VGSAVKDLKE GDEVYANVSE KALEGPKQFG SLAEYTAVEE KLLALKPKNI
201: DFAQAAGLPL AIETADEGLV RTEFSAGKSI LVLNGAGGVG SLVIQLAKHV YGASKVAATA STEKLELVRS LGADLAIDYT KENIEDLPDK YDVVFDAIGM
301: CDKAVKVIKE GGKVVALTGA VTPPGFRFVV TSNGDVLKKL NPYIESGKVK PVVDPKGPFP FSRVADAFSY LETNHATGKV VVYPIP

Arabidopsis Description

AORNADPH-dependent alkenal/one oxidoreductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUC1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.