Factsheet for Bra001583.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra037442.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15090.1	Bra037442.1-P	AT5G49010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82448	Canola	mitochondrion	98.57	98.57
CDX75808	Canola	mitochondrion	97.14	97.14
AT3G15090.1	Thale cress	mitochondrion	90.0	86.07
Bra027280.1-P	Field mustard	mitochondrion	89.71	86.03
VIT_19s0014g01890.t01	Wine grape	mitochondrion	68.29	66.2
Os01t0753100-01	Rice	mitochondrion	68.0	65.21
PGSC0003DMT400039777	Potato	mitochondrion	68.29	65.12
GSMUA_Achr8P27200_001	Banana	mitochondrion	68.0	64.5
Zm00001d043432_P001	Maize	mitochondrion	66.57	64.19
KRH27297	Soybean	mitochondrion	66.29	63.74
HORVU3Hr1G072320.2	Barley	mitochondrion	64.86	62.53
TraesCS3D01G291700.2	Wheat	mitochondrion	64.86	62.53
TraesCS3B01G326600.1	Wheat	mitochondrion	64.57	62.26
GSMUA_Achr3P15520_001	Banana	mitochondrion	64.86	61.68
TraesCS3A01G292000.1	Wheat	mitochondrion	63.71	61.43
Solyc12g014050.1.1	Tomato	plastid	67.71	59.85
KRH22019	Soybean	mitochondrion	65.14	58.91
KXG33382	Sorghum	plastid	67.43	56.32
Bra001207.1-P	Field mustard	cytosol	26.29	27.96
Bra024616.1-P	Field mustard	plastid	27.14	24.68
Bra013540.1-P	Field mustard	cytosol	20.57	22.15
Bra035926.1-P	Field mustard	cytosol	19.71	21.3
Bra003241.1-P	Field mustard	cytosol	21.14	15.85

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_N	EnsemblPlantsGene:Bra001583	EnsemblPlants:Bra001583.1
EnsemblPlants:Bra001583.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:GroES-like_sf	UniProt:M4CBK3	InterPro:NAD(P)-bd_dom_sf	PFAM:PF08240	PFAM:PF13602
InterPro:PKS_ER	PANTHER:PTHR43482	PANTHER:PTHR43482:SF1	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
UniParc:UPI00025409EB	SEG:seg	:	:	:	:

Description

AT3G15090 (E=7e-143) | oxidoreductase, zinc-binding dehydrogenase family protein

Coordinates

chrA03:+:17190630..17192522

Molecular Weight (calculated)

37884.9 Da

IEP (calculated)

9.425

GRAVY (calculated)

0.003

Length

350 amino acids

Sequence
(BLAST)

001: MRGMRSLRGT SKAVSIFRPA RLSSLRSIFT GCRAVMLLRF GGPEVLELRE NVPVPNLNPN EIRAGYGRSV FQPHLPIIIG RDVSGEVAAV GNSVKSFRVG
101: QEVFGALHPT ALRGTYTDYG VLSEEELTEK PASVSHVEAS AIPFAALTAW RALKSNARIL EGQRVLVFGG GGAVGFAAIQ IAVASGCHVT ASCVGQTRDR
201: ILAAGAEQAV DYTTEDIEMV VKGKFDAVLD TIGRPETERI GINFLRKGGN YMTLQGEAAS LTDRYGFVIG LPLATSLLAK KKIQYQYSHG IDYWWSYMRA
301: DPEGLAEIQR LVGAGKLKIP VEKTFPITEV VAAHEAKEKK EIPGKVVLEL

Best Arabidopsis Sequence Match ( AT3G15090.1 )
(BLAST)

001: MRVMRSLRGN SGAGLVFRPA RLNSLRSVFT GCRAVILPRF GGPEVFELRE NVPVPNLNPN EVLVKAKAVS VNPLDCRIRA GYGRSVFQPH LPIIVGRDVS
101: GEVAAIGTSV KSLKVGQEVF GALHPTALRG TYTDYGILSE DELTEKPSSI SHVEASAIPF AALTAWRALK SNARITEGQR LLVFGGGGAV GFSAIQLAVA
201: SGCHVTASCV GQTKDRILAA GAEQAVDYTT EDIELAVKGK FDAVLDTIGG PETERIGINF LRKGGNYMTL QGEAASLTDK YGFVVGLPLA TSLLMKKKIQ
301: YQYSHGIDYW WTYMRADPEG LAEIQRLVGA GKLKIPVEKT FPITDVVAAH EAKEKKQIPG KVVLEF

Arabidopsis Description

AT3g15090/K15M2_24 [Source:UniProtKB/TrEMBL;Acc:Q9LK96]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.