CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
EES18994

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15090.1	EES18994	AT5G49010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043432_P001	Maize	mitochondrion	82.82	95.59
Os01t0753100-01	Rice	mitochondrion	79.24	90.96
TraesCS3D01G291700.2	Wheat	mitochondrion	74.22	85.67
HORVU3Hr1G072320.2	Barley	mitochondrion	74.22	85.67
TraesCS3B01G326600.1	Wheat	mitochondrion	73.99	85.4
TraesCS3A01G292000.1	Wheat	mitochondrion	73.99	85.4
GSMUA_Achr8P27200_001	Banana	mitochondrion	67.06	76.15
GSMUA_Achr3P15520_001	Banana	mitochondrion	64.44	73.37
VIT_19s0014g01890.t01	Wine grape	mitochondrion	63.01	73.13
PGSC0003DMT400039777	Potato	mitochondrion	62.53	71.39
KRH27297	Soybean	mitochondrion	60.14	69.23
AT3G15090.1	Thale cress	mitochondrion	60.14	68.85
Bra027280.1-P	Field mustard	mitochondrion	59.9	68.77
Solyc12g014050.1.1	Tomato	plastid	64.44	68.18
CDX82448	Canola	mitochondrion	56.8	68.0
CDX75808	Canola	mitochondrion	56.56	67.71
Bra001583.1-P	Field mustard	mitochondrion	56.32	67.43
KRH22019	Soybean	mitochondrion	58.47	63.31
CDX98523	Canola	plastid	64.92	42.97
CDX97630	Canola	plastid	64.44	42.65
EER97004	Sorghum	cytosol, peroxisome, plastid	23.63	29.03
OQU89739	Sorghum	cytosol	22.91	28.15
OQU85913	Sorghum	cytosol	20.29	25.91
EES10573	Sorghum	plastid	21.24	25.87
KXG25078	Sorghum	plastid	24.34	25.5
OQU83589	Sorghum	cytosol	18.85	24.92
EES12890	Sorghum	plastid	19.09	23.12
KXG40429	Sorghum	plastid	19.09	20.83

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	UniProt:A0A1B6Q635	InterPro:ADH_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf
EnsemblPlants:KXG33382	ProteinID:KXG33382	ProteinID:KXG33382.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF08240	PFAM:PF13602
InterPro:PKS_ER	PANTHER:PTHR43482	PANTHER:PTHR43482:SF1	SMART:SM00829	EnsemblPlantsGene:SORBI_3003G298200	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI00081ABE8B	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:62976621..62981335

Molecular Weight (calculated)

44326.3 Da

IEP (calculated)

9.878

GRAVY (calculated)

-0.020

Length

419 amino acids

Sequence
(BLAST)

001: MSWSHKPIYL TPSHTLPSPP VSKGVASPSQ PLPPPGSRVA GAAQPSVPWG RGYSAMWWRA VRARRRVAGA RPASTAAAGA EKSCRAVVVP RFGGPEVLEI
101: RQGVPVPDLK PREVLVRARA VSINPLDLRM RSGYGRSIFE PLLPLIIGRD ISGEVAATGT SASSFSIGQE VFGSLHPTAL RGTYADYAIL SLDELTLKPS
201: TLSHVEASAI PFAALTAWRA LHGTARISEG QRVLVIGGGG AVGLAAVQLA VAAGCGVSAT CGTQSIERVI GAGAEQAIDY TAEDTEAAVK GKFDAVLDTI
301: GVPETERIGI NVLRRGGHYM TLQGEAAALA DRYGLAVGLP AATAALLKKQ TQYRYSHGIE YWWTYMRADA EGLHEIQRLS GAGKLQIPVE KTFPISHARE
401: AHAAKEKKLV PGKVVLEFD

Best Arabidopsis Sequence Match ( AT3G15090.1 )
(BLAST)

001: MRVMRSLRGN SGAGLVFRPA RLNSLRSVFT GCRAVILPRF GGPEVFELRE NVPVPNLNPN EVLVKAKAVS VNPLDCRIRA GYGRSVFQPH LPIIVGRDVS
101: GEVAAIGTSV KSLKVGQEVF GALHPTALRG TYTDYGILSE DELTEKPSSI SHVEASAIPF AALTAWRALK SNARITEGQR LLVFGGGGAV GFSAIQLAVA
201: SGCHVTASCV GQTKDRILAA GAEQAVDYTT EDIELAVKGK FDAVLDTIGG PETERIGINF LRKGGNYMTL QGEAASLTDK YGFVVGLPLA TSLLMKKKIQ
301: YQYSHGIDYW WTYMRADPEG LAEIQRLVGA GKLKIPVEKT FPITDVVAAH EAKEKKQIPG KVVLEF

Arabidopsis Description

AT3g15090/K15M2_24 [Source:UniProtKB/TrEMBL;Acc:Q9LK96]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.