Factsheet for Os01t0753100-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7
cytosol 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998
mitochondrion: 23027867

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os05t0143400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15090.1	Os05t0143400-01	AT5G49010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043432_P001	Maize	mitochondrion	89.32	89.81
TraesCS3D01G291700.2	Wheat	mitochondrion	87.4	87.88
TraesCS3B01G326600.1	Wheat	mitochondrion	87.4	87.88
TraesCS3A01G292000.1	Wheat	mitochondrion	87.4	87.88
HORVU3Hr1G072320.2	Barley	mitochondrion	87.12	87.6
KXG33382	Sorghum	plastid	90.96	79.24
GSMUA_Achr8P27200_001	Banana	mitochondrion	77.26	76.42
GSMUA_Achr3P15520_001	Banana	mitochondrion	75.07	74.46
VIT_19s0014g01890.t01	Wine grape	mitochondrion	73.15	73.96
PGSC0003DMT400039777	Potato	mitochondrion	73.15	72.75
KRH27297	Soybean	mitochondrion	69.32	69.51
Bra027280.1-P	Field mustard	mitochondrion	69.32	69.32
AT3G15090.1	Thale cress	mitochondrion	69.32	69.13
CDX82448	Canola	mitochondrion	65.75	68.57
CDX75808	Canola	mitochondrion	65.48	68.29
Bra001583.1-P	Field mustard	mitochondrion	65.21	68.0
Solyc12g014050.1.1	Tomato	plastid	73.42	67.68
KRH22019	Soybean	mitochondrion	67.12	63.31
CDX98523	Canola	plastid	70.41	40.6
CDX97630	Canola	plastid	70.14	40.44
Os04t0372700-01	Rice	plasma membrane	10.96	31.01
Os09t0502500-01	Rice	plasma membrane	26.85	28.82
Os09t0503100-01	Rice	plasma membrane	26.03	27.46
Os08t0379400-02	Rice	plastid	27.95	26.15
Os09t0503000-01	Rice	cytosol, mitochondrion, plastid	11.51	25.61
Os04t0359100-01	Rice	plasma membrane	23.01	25.3
Os02t0805600-01	Rice	plasma membrane	22.47	25.0
Os04t0358000-01	Rice	endoplasmic reticulum	21.64	24.92
Os10t0561100-01	Rice	cytosol	21.64	23.87
Os04t0359700-00	Rice	cytosol, mitochondrion, peroxisome, plastid	23.56	23.82
Os05t0313500-01	Rice	peroxisome, plastid	21.64	23.58
Os03t0101600-01	Rice	plasma membrane	21.64	22.9

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	EntrezGene:4327011	InterPro:ADH_N	ProteinID:BAD87188.1
ProteinID:BAD87277.1	ProteinID:BAF06185.1	ProteinID:BAS74380.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os01g0753100
EnsemblPlants:Os01t0753100-01	PFAM:PF08240	PFAM:PF13602	InterPro:PKS_ER	PANTHER:PTHR43482	PANTHER:PTHR43482:SF1
UniProt:Q5JMM6	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI00004C28DA	RefSeq:XP_015621272.1
SEG:seg	:	:	:	:	:

Description

Alcohol dehydrogenase superfamily, zinc-containing protein. (Os01t0753100-01);Similar to reticulon-4-interacting protein 1. (Os01t0753100-02)

Coordinates

chr1:+:31599199..31604576

Molecular Weight (calculated)

38816.7 Da

IEP (calculated)

9.439

GRAVY (calculated)

0.018

Length

365 amino acids

Sequence
(BLAST)

001: MWWRAARARR RIAGARAAST SAAAAGEKSC RAVVVPRFGG PEVLEVRQGV PVPDLKPGDV LVRARAVSIN PLDLRMRSGY GRSIFEPVLP LIIGRDISGE
101: VAATGTSVSS FTIGQEVFGA LHPTAIRGTY TDYAILSQDE LTSKPSTLSH VEASAIPFAA LTAWRALHGT ARISEGQRVL VIGGGGAVGL AAVQLAVAAG
201: CSVSATCGTK SIEQVLAAGA EKAIDYTAED TESAVKGKFD AVLDTIGVPE TERIGINVLR RGGHYMTLQG EAAALADRYG LAVGLPAATA VLLKKQMQYR
301: YSHGIDYWWT YMRADSEGLH EIQRLSGAGK LQIPVEKTFP ISKVREAHEA KEKRLVPGKV VLEFD

Best Arabidopsis Sequence Match ( AT3G15090.1 )
(BLAST)

001: MRVMRSLRGN SGAGLVFRPA RLNSLRSVFT GCRAVILPRF GGPEVFELRE NVPVPNLNPN EVLVKAKAVS VNPLDCRIRA GYGRSVFQPH LPIIVGRDVS
101: GEVAAIGTSV KSLKVGQEVF GALHPTALRG TYTDYGILSE DELTEKPSSI SHVEASAIPF AALTAWRALK SNARITEGQR LLVFGGGGAV GFSAIQLAVA
201: SGCHVTASCV GQTKDRILAA GAEQAVDYTT EDIELAVKGK FDAVLDTIGG PETERIGINF LRKGGNYMTL QGEAASLTDK YGFVVGLPLA TSLLMKKKIQ
301: YQYSHGIDYW WTYMRADPEG LAEIQRLVGA GKLKIPVEKT FPITDVVAAH EAKEKKQIPG KVVLEF

Arabidopsis Description

AT3g15090/K15M2_24 [Source:UniProtKB/TrEMBL;Acc:Q9LK96]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.