Factsheet for Bra027280.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra037442.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15090.1	Bra037442.1-P	AT5G49010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001583.1-P	Field mustard	mitochondrion	86.03	89.71
AT3G15090.1	Thale cress	mitochondrion	88.49	88.25
VIT_19s0014g01890.t01	Wine grape	mitochondrion	69.04	69.81
Os01t0753100-01	Rice	mitochondrion	69.32	69.32
PGSC0003DMT400039777	Potato	mitochondrion	68.77	68.39
Zm00001d043432_P001	Maize	mitochondrion	67.67	68.04
GSMUA_Achr8P27200_001	Banana	mitochondrion	67.67	66.94
TraesCS3D01G291700.2	Wheat	mitochondrion	66.3	66.67
KRH27297	Soybean	mitochondrion	66.3	66.48
TraesCS3B01G326600.1	Wheat	mitochondrion	66.03	66.39
HORVU3Hr1G072320.2	Barley	mitochondrion	65.75	66.12
TraesCS3A01G292000.1	Wheat	mitochondrion	65.21	65.56
GSMUA_Achr3P15520_001	Banana	mitochondrion	64.93	64.4
Solyc12g014050.1.1	Tomato	plastid	68.22	62.88
KRH22019	Soybean	mitochondrion	64.93	61.24
KXG33382	Sorghum	plastid	68.77	59.9
CDX97630	Canola	plastid	98.08	56.56
Bra001207.1-P	Field mustard	cytosol	26.3	29.18
Bra024616.1-P	Field mustard	plastid	27.67	26.23
Bra013540.1-P	Field mustard	cytosol	21.1	23.69
Bra035926.1-P	Field mustard	cytosol	20.55	23.15
Bra003241.1-P	Field mustard	cytosol	20.82	16.27

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_N	EnsemblPlantsGene:Bra027280	EnsemblPlants:Bra027280.1
EnsemblPlants:Bra027280.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:GroES-like_sf	UniProt:M4EER8	InterPro:NAD(P)-bd_dom_sf	PFAM:PF08240	PFAM:PF13602
InterPro:PKS_ER	PANTHER:PTHR43482	PANTHER:PTHR43482:SF1	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
UniParc:UPI0002547B22	SEG:seg	:	:	:	:

Description

AT3G15090 (E=4e-167) | oxidoreductase, zinc-binding dehydrogenase family protein

Coordinates

chrA05:-:20091921..20093688

Molecular Weight (calculated)

39403.0 Da

IEP (calculated)

9.237

GRAVY (calculated)

0.077

Length

365 amino acids

Sequence
(BLAST)

001: MRVMRSYRGN SIAGLVSHPA RLSPLRSIFT GCRAVMLPRF GGPEVLELRE NVPVPNLNPN EVLVRARAVS INPLDCRIRA GYGRSVLQPH LPVVIGRDIS
101: GEVAAVGNSV KAFKVGQEVF GALHPTALRG TYTDYGILSE EELTEKPSSV SHVEASAIPF AALTAWSALK SNARILEGQR LLVFGGGAVG FAAIQLGVAF
201: GCHVTASCVG QTKERILAAG AEQAVDYLTE DIEVAVKGKF DAVLDTIGRP ETERIGINFL RKGGNYMTLQ GEAASLTDRY GFLIGLPLAT SLLAKKKIQY
301: LYSHGIDYWW TYMRADPEGL AEIQRLVGGG KLKIPVEKTF PITEVVAAHE AKEKKLVPGK VVLEL

Best Arabidopsis Sequence Match ( AT3G15090.1 )
(BLAST)

001: MRVMRSLRGN SGAGLVFRPA RLNSLRSVFT GCRAVILPRF GGPEVFELRE NVPVPNLNPN EVLVKAKAVS VNPLDCRIRA GYGRSVFQPH LPIIVGRDVS
101: GEVAAIGTSV KSLKVGQEVF GALHPTALRG TYTDYGILSE DELTEKPSSI SHVEASAIPF AALTAWRALK SNARITEGQR LLVFGGGGAV GFSAIQLAVA
201: SGCHVTASCV GQTKDRILAA GAEQAVDYTT EDIELAVKGK FDAVLDTIGG PETERIGINF LRKGGNYMTL QGEAASLTDK YGFVVGLPLA TSLLMKKKIQ
301: YQYSHGIDYW WTYMRADPEG LAEIQRLVGA GKLKIPVEKT FPITDVVAAH EAKEKKQIPG KVVLEF

Arabidopsis Description

AT3g15090/K15M2_24 [Source:UniProtKB/TrEMBL;Acc:Q9LK96]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.