Factsheet for Zm00001d043432_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

extracellular: 20408568
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d006788_P001
Zm00001d010541_P001
Zm00001d024805_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15090.1	Zm00001d006788_P001	AT5G49010.1	21798944
AT3G15090.1	Zm00001d010541_P001	AT5G49010.1	21798944
AT3G15090.1	Zm00001d024805_P001	AT5G49010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0753100-01	Rice	mitochondrion	89.81	89.32
HORVU3Hr1G072320.2	Barley	mitochondrion	84.02	84.02
TraesCS3D01G291700.2	Wheat	mitochondrion	83.75	83.75
TraesCS3B01G326600.1	Wheat	mitochondrion	83.75	83.75
TraesCS3A01G292000.1	Wheat	mitochondrion	83.47	83.47
KXG33382	Sorghum	plastid	95.59	82.82
GSMUA_Achr8P27200_001	Banana	mitochondrion	76.86	75.61
VIT_19s0014g01890.t01	Wine grape	mitochondrion	72.18	72.58
GSMUA_Achr3P15520_001	Banana	mitochondrion	73.55	72.55
PGSC0003DMT400039777	Potato	mitochondrion	71.35	70.57
KRH27297	Soybean	mitochondrion	69.7	69.51
AT3G15090.1	Thale cress	mitochondrion	68.59	68.03
Bra027280.1-P	Field mustard	mitochondrion	68.04	67.67
CDX82448	Canola	mitochondrion	64.74	67.14
CDX75808	Canola	mitochondrion	64.46	66.86
Bra001583.1-P	Field mustard	mitochondrion	64.19	66.57
Solyc12g014050.1.1	Tomato	plastid	71.63	65.66
KRH22019	Soybean	mitochondrion	67.77	63.57
CDX98523	Canola	plastid	69.15	39.65
CDX97630	Canola	plastid	68.87	39.49
Zm00001d032332_P001	Maize	plastid	29.48	27.72
Zm00001d021025_P001	Maize	mitochondrion, peroxisome, plastid	26.17	27.46
Zm00001d006069_P001	Maize	peroxisome	27.55	26.88
Zm00001d042260_P002	Maize	mitochondrion	27.55	26.88
Zm00001d025166_P001	Maize	plastid	27.0	26.56
Zm00001d018418_P002	Maize	cytosol	22.86	24.41
Zm00001d051987_P001	Maize	cytosol	20.39	24.18
Zm00001d002246_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	22.31	23.14
Zm00001d027276_P001	Maize	extracellular	20.94	20.43

Protein Annotations

EntrezGene:100283093	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_N	UniProt:B6TEK2
EMBL:BT055733	EMBL:EU963417	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM37995.1	PFAM:PF08240
PFAM:PF13602	InterPro:PKS_ER	PANTHER:PTHR43482	PANTHER:PTHR43482:SF1	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI000182BF1C	EnsemblPlantsGene:Zm00001d043432	EnsemblPlants:Zm00001d043432_P001	EnsemblPlants:Zm00001d043432_T001	SEG:seg

Description

GroES-like zinc-binding alcohol dehydrogenase family protein

Coordinates

chr3:-:199636305..199641922

Molecular Weight (calculated)

38850.1 Da

IEP (calculated)

8.837

GRAVY (calculated)

0.085

Length

363 amino acids

Sequence
(BLAST)

001: MWWRAVRRRW VATARPASSA AAGAEKSCRA VVVPRFGGPE VLEVRQGMPV PDLKPQEVLV RARAVSINPL DLRMRCGYGR SIFEPLLPLI IGRDISGEVA
101: ATGTLASSFS IGQEVFGSLH PTALRGTYAD YAILSLDELT LKPSTLSHVE ASAIPFAALT AWRALHGTAR ISEGQRVLVI GGGGAVGLAA VQLAVAAGCV
201: VSATCGTQSI ERVMGVGAEQ AIDYTAEDTE AAIKGKFDAV LDTIGVPETE RIGINVLRRG GHYMTLQGEA AALADRYGLA VGLPAATAVL LKKQMQYRYS
301: HGIEYWWTYM RADAEGLHEI QRLSGAGKLQ IPVEKTFPIS HVREAHAAKE KKLAPGKVVL EFD

Best Arabidopsis Sequence Match ( AT3G15090.1 )
(BLAST)

001: MRVMRSLRGN SGAGLVFRPA RLNSLRSVFT GCRAVILPRF GGPEVFELRE NVPVPNLNPN EVLVKAKAVS VNPLDCRIRA GYGRSVFQPH LPIIVGRDVS
101: GEVAAIGTSV KSLKVGQEVF GALHPTALRG TYTDYGILSE DELTEKPSSI SHVEASAIPF AALTAWRALK SNARITEGQR LLVFGGGGAV GFSAIQLAVA
201: SGCHVTASCV GQTKDRILAA GAEQAVDYTT EDIELAVKGK FDAVLDTIGG PETERIGINF LRKGGNYMTL QGEAASLTDK YGFVVGLPLA TSLLMKKKIQ
301: YQYSHGIDYW WTYMRADPEG LAEIQRLVGA GKLKIPVEKT FPITDVVAAH EAKEKKQIPG KVVLEF

Arabidopsis Description

AT3g15090/K15M2_24 [Source:UniProtKB/TrEMBL;Acc:Q9LK96]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.