Factsheet for Zm00001d032332_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 20089766
plastid: 22065420
plastid: 23198870

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG25078	Sorghum	plastid	89.9	86.75
HORVU6Hr1G025630.2	Barley	cytosol	56.48	83.52
GSMUA_Achr4P07780_001	Banana	cytosol	61.66	77.02
Os08t0379400-02	Rice	plastid	76.94	76.15
TraesCS6D01G122800.1	Wheat	plastid	74.35	74.93
TraesCS6B01G161600.1	Wheat	plastid	74.35	74.93
TraesCS6A01G133100.1	Wheat	plastid	73.32	73.89
VIT_01s0127g00740.t01	Wine grape	plastid	67.1	68.7
HORVU6Hr1G025730.2	Barley	plastid	74.09	67.61
Solyc05g005480.2.1	Tomato	plastid	67.36	67.01
AT1G23740.1	Thale cress	plastid	66.06	66.06
CDY47631	Canola	plastid	65.8	65.97
Bra024616.1-P	Field mustard	plastid	65.28	65.45
CDY61544	Canola	plastid	65.28	65.45
KRH56616	Soybean	cytosol	18.13	65.42
PGSC0003DMT400079606	Potato	cytosol	65.28	64.95
KRH45668	Soybean	nucleus	66.06	64.23
KRG99340	Soybean	plastid	65.54	64.05
KRG93309	Soybean	cytosol	52.33	63.12
KRH07194	Soybean	nucleus	52.07	63.01
KRG93311	Soybean	cytosol	51.3	61.49
KRG93310	Soybean	cytosol	50.52	60.94
KRG93306	Soybean	cytosol	50.0	59.94
KRG93308	Soybean	extracellular	20.73	45.2
Zm00001d043432_P001	Maize	mitochondrion	27.72	29.48
Zm00001d021025_P001	Maize	mitochondrion, peroxisome, plastid	25.91	28.9
Zm00001d025166_P001	Maize	plastid	27.46	28.73
Zm00001d002246_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	25.39	28.0
Zm00001d051987_P001	Maize	cytosol	20.73	26.14
Zm00001d006069_P001	Maize	peroxisome	24.87	25.81
Zm00001d042260_P002	Maize	mitochondrion	24.87	25.81
Zm00001d018418_P002	Maize	cytosol	22.28	25.29
Zm00001d027276_P001	Maize	extracellular	19.43	20.16

Protein Annotations

EntrezGene:100284837	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_N	UniProt:B6TXY3
EMBL:EU969848	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009409	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579
GO:GO:0009628	GO:GO:0009941	GO:GO:0010319	GO:GO:0016491	GO:GO:0035671	GO:GO:0035798
GO:GO:0048046	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM04877.1	PFAM:PF08240
PFAM:PF13602	InterPro:PKS_ER	ScanProsite:PS01162	PANTHER:PTHR44573	InterPro:Quin_OxRdtase/zeta-crystal_CS	SMART:SM00829
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000182E659	EnsemblPlantsGene:Zm00001d032332	EnsemblPlants:Zm00001d032332_P001	EnsemblPlants:Zm00001d032332_T001
SEG:seg	:	:	:	:	:

Description

Quinone oxidoreductase-like protein At1g23740

Coordinates

chr1:+:222796870..222798578

Molecular Weight (calculated)

39819.8 Da

IEP (calculated)

8.755

GRAVY (calculated)

0.088

Length

386 amino acids

Sequence
(BLAST)

001: MHAFLSSSIP ATSYSRSYFL PRPPQAPVKL VVPSSAPRVA AGRRTASEAG RSGRCVVAVS ASSSPATAAV ATEVPGVMKA WVYDAYGDAG VLKLDEAAAV
101: PAVGEDQVLV KVVAAALNPV DAKRRAGKFQ ATDSPLPTVP GYDLSGVVVK VGSQVKKLKE GDEVYGMVSE NPLQGPKQSG SLAEYTAVEE KLLALKPKGL
201: DFAQAASLPL AVETANEGLE RAGISAGKSV LILGGAGGVG SLAIQLAKHV YGASKVAATA STKKIELLKS LGADVAIDYT KENLEELPDK YDIVFDGVGQ
301: GDKAVKVVKE GGSVVVLTGA VSPPGFRFVV TSNGSVLEKL NPYLESGKLK PLIDPEGPFS FSQVVEAFSY LETGRATGKV VISPIP

Best Arabidopsis Sequence Match ( AT1G23740.1 )
(BLAST)

001: MNAALATTTA TTPVLRRETP LLHYCSLTTK SPVYQINRVR FGSCVQTVSK KFLKISASSQ SASAAVNVTA DASIPKEMKA WVYSDYGGVD VLKLESNIVV
101: PEIKEDQVLI KVVAAALNPV DAKRRQGKFK ATDSPLPTVP GYDVAGVVVK VGSAVKDLKE GDEVYANVSE KALEGPKQFG SLAEYTAVEE KLLALKPKNI
201: DFAQAAGLPL AIETADEGLV RTEFSAGKSI LVLNGAGGVG SLVIQLAKHV YGASKVAATA STEKLELVRS LGADLAIDYT KENIEDLPDK YDVVFDAIGM
301: CDKAVKVIKE GGKVVALTGA VTPPGFRFVV TSNGDVLKKL NPYIESGKVK PVVDPKGPFP FSRVADAFSY LETNHATGKV VVYPIP

Arabidopsis Description

AORNADPH-dependent alkenal/one oxidoreductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUC1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.