Factsheet for Solyc05g005480.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

plastid: 20363867
extracellular: 22364583
plastid: 22908117
nucleus: 28394025
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079606	Potato	cytosol	94.59	94.59
HORVU6Hr1G025630.2	Barley	cytosol	57.22	85.06
VIT_01s0127g00740.t01	Wine grape	plastid	75.52	77.72
KRG99340	Soybean	plastid	73.45	72.15
KRH45668	Soybean	nucleus	72.94	71.28
AT1G23740.1	Thale cress	plastid	70.88	71.24
CDY61544	Canola	plastid	69.59	70.13
Bra024616.1-P	Field mustard	plastid	69.33	69.87
CDY47631	Canola	plastid	68.81	69.35
Os08t0379400-02	Rice	plastid	69.33	68.97
TraesCS6D01G122800.1	Wheat	plastid	68.04	68.93
TraesCS6A01G133100.1	Wheat	plastid	67.27	68.15
TraesCS6B01G161600.1	Wheat	plastid	67.01	67.89
Zm00001d032332_P001	Maize	plastid	67.01	67.36
KXG25078	Sorghum	plastid	67.27	65.25
HORVU6Hr1G025730.2	Barley	plastid	67.78	62.17
Solyc09g059040.2.1	Tomato	plastid	28.61	33.74
Solyc09g059030.2.1	Tomato	plastid	27.06	31.91
Solyc09g059020.2.1	Tomato	cytosol, extracellular, peroxisome	20.88	29.56
Solyc02g078940.2.1	Tomato	extracellular	23.97	28.62
Solyc03g095360.2.1	Tomato	plastid	24.23	27.01
Solyc12g014050.1.1	Tomato	plastid	25.77	25.25
Solyc03g095320.1.1	Tomato	cytosol, plastid	5.15	22.73
Solyc06g034120.2.1	Tomato	extracellular	21.91	22.14

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009409	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009628	GO:GO:0009941	GO:GO:0010319
GO:GO:0016491	GO:GO:0035671	GO:GO:0035798	GO:GO:0048046	GO:GO:0055114	GO:GO:0102978
InterPro:GroES-like_sf	UniProt:K4BW79	InterPro:NAD(P)-bd_dom_sf	PFAM:PF08240	PFAM:PF13602	InterPro:PKS_ER
ScanProsite:PS01162	PANTHER:PTHR44573	InterPro:Quin_OxRdtase/zeta-crystal_CS	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
EnsemblPlantsGene:Solyc05g005480.2	EnsemblPlants:Solyc05g005480.2.1	UniParc:UPI0002766E10	SEG:seg	:	:

Description

EO2-methylene-furan-3-one reductase [Source:UniProtKB/Swiss-Prot;Acc:K4BW79]

Coordinates

chr5:+:352211..355615

Molecular Weight (calculated)

41003.3 Da

IEP (calculated)

8.601

GRAVY (calculated)

0.036

Length

388 amino acids

Sequence
(BLAST)

001: MEALLSSTTL QLKPLHPPSS FSSLHSPFSS ISVLRVKGSK KAETFIQRSN FSTVLPLRVS ASSQAAAAET STSISIPSEM KAWSYTDYGS VDVLKLESNV
101: AVPDIKEDQV LIKIVAAALN PVDFKRRLGK FKATDSPLPT VPGYDVAGVV VKVGSQVKGL KEGDEVYGDI HEKALDGPKQ FGSLAEYTAV EEKLVALKPK
201: NLSFAEAAAL PLAIETAYEG LEKAGFSSGK SILVLGGAGG VGSLVIQLAK HVFGASKVAA TSSTGKLELL KSLGADLAID YTKENFEDLP DKFDVVYDSV
301: GQGEKAVKVV KEGGSVVVLT GAVTPPGFRF VVTSNGEMLK KLNPYLESGK VKPVIDPKGP FSFDKVVDAF SYLETGRATG KVVIHPIP

Best Arabidopsis Sequence Match ( AT1G23740.1 )
(BLAST)

001: MNAALATTTA TTPVLRRETP LLHYCSLTTK SPVYQINRVR FGSCVQTVSK KFLKISASSQ SASAAVNVTA DASIPKEMKA WVYSDYGGVD VLKLESNIVV
101: PEIKEDQVLI KVVAAALNPV DAKRRQGKFK ATDSPLPTVP GYDVAGVVVK VGSAVKDLKE GDEVYANVSE KALEGPKQFG SLAEYTAVEE KLLALKPKNI
201: DFAQAAGLPL AIETADEGLV RTEFSAGKSI LVLNGAGGVG SLVIQLAKHV YGASKVAATA STEKLELVRS LGADLAIDYT KENIEDLPDK YDVVFDAIGM
301: CDKAVKVIKE GGKVVALTGA VTPPGFRFVV TSNGDVLKKL NPYIESGKVK PVVDPKGPFP FSRVADAFSY LETNHATGKV VVYPIP

Arabidopsis Description

AORNADPH-dependent alkenal/one oxidoreductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUC1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.