CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024616.1-P	Field mustard	plastid	97.92	97.92
CDY61544	Canola	plastid	96.62	96.62
AT1G23740.1	Thale cress	plastid	89.87	89.64
HORVU6Hr1G025630.2	Barley	cytosol	54.03	79.69
VIT_01s0127g00740.t01	Wine grape	plastid	70.39	71.88
Solyc05g005480.2.1	Tomato	plastid	69.35	68.81
KRH45668	Soybean	nucleus	70.39	68.26
KRG99340	Soybean	plastid	69.61	67.85
PGSC0003DMT400079606	Potato	cytosol	68.31	67.78
TraesCS6D01G122800.1	Wheat	plastid	66.49	66.84
Os08t0379400-02	Rice	plastid	67.01	66.15
TraesCS6A01G133100.1	Wheat	plastid	65.71	66.06
Zm00001d032332_P001	Maize	plastid	65.97	65.8
TraesCS6B01G161600.1	Wheat	plastid	65.45	65.8
KXG25078	Sorghum	plastid	66.49	64.0
HORVU6Hr1G025730.2	Barley	plastid	65.97	60.05
CDX79076	Canola	cytosol, peroxisome, plastid	16.88	32.34
CDY34537	Canola	cytosol	27.27	31.91
CDX80695	Canola	cytosol	27.27	31.91
CDX82839	Canola	cytosol	24.42	28.92
CDX75808	Canola	mitochondrion	24.94	27.43
CDX82448	Canola	mitochondrion	24.68	27.14
CDY16814	Canola	cytosol	5.71	24.44
CDX87218	Canola	cytosol	5.71	24.44
CDY68244	Canola	mitochondrion	11.17	23.63
CDY32016	Canola	peroxisome	21.04	23.28
CDY72063	Canola	plastid	11.69	21.43
CDX67648	Canola	extracellular	11.43	19.64
CDX97630	Canola	plastid	25.97	15.8
CDX98523	Canola	plastid	25.71	15.64

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	GO:A0A078ICP6	UniProt:A0A078ICP6	InterPro:ADH_N
EnsemblPlants:CDY47631	ProteinID:CDY47631	ProteinID:CDY47631.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00087850001
InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF08240	PFAM:PF13602	InterPro:PKS_ER	ScanProsite:PS01162
PANTHER:PTHR44573	InterPro:Quin_OxRdtase/zeta-crystal_CS	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0004EE3D34
SEG:seg	:	:	:	:	:

Description

BnaC05g18870DBnaC05g18870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ICP6]

Coordinates

chrLK032727:-:21054..22779

Molecular Weight (calculated)

40543.8 Da

IEP (calculated)

9.315

GRAVY (calculated)

0.022

Length

385 amino acids

Sequence
(BLAST)

001: MNTALATTTA TTPARRRETP PLRHCSLAKP SVFRLNRVGF KSGVQTIGKS LLRISASNQS ASAAVNVAAD TSIPSEMKAW VYSEYGGVDV LKLESNIAVP
101: VVNDDQVLIK VVAAALNPVD AKRRQGKFKA TDSPLPTVPG YDVAGVVVKV GSAVKDFKEG DEVYANVSEK ALEGPKQSGS LAEYTAVEEK LLALKPKNID
201: FAQAAGLPLA IETADEGLVR TEFSAGKSVL VLNGAGGVGS LAIQLAKHVY GASKVAATAS TGKLELVRSL GADLAIDYTK ENIEDLTERF DVVFDAIGMC
301: DKAVKVIKEG GKVVALTGAV TPPGFRFVVT SNGDVLKKLN PYIESGKVKP VVDPKGPFPF SRVADAFSYL ETNHATGKVV VYPIP

Best Arabidopsis Sequence Match ( AT1G23740.1 )
(BLAST)

001: MNAALATTTA TTPVLRRETP LLHYCSLTTK SPVYQINRVR FGSCVQTVSK KFLKISASSQ SASAAVNVTA DASIPKEMKA WVYSDYGGVD VLKLESNIVV
101: PEIKEDQVLI KVVAAALNPV DAKRRQGKFK ATDSPLPTVP GYDVAGVVVK VGSAVKDLKE GDEVYANVSE KALEGPKQFG SLAEYTAVEE KLLALKPKNI
201: DFAQAAGLPL AIETADEGLV RTEFSAGKSI LVLNGAGGVG SLVIQLAKHV YGASKVAATA STEKLELVRS LGADLAIDYT KENIEDLPDK YDVVFDAIGM
301: CDKAVKVIKE GGKVVALTGA VTPPGFRFVV TSNGDVLKKL NPYIESGKVK PVVDPKGPFP FSRVADAFSY LETNHATGKV VVYPIP

Arabidopsis Description

AORNADPH-dependent alkenal/one oxidoreductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUC1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.