CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013540.1-P	Field mustard	cytosol	97.54	97.54
AT4G21580.1	Thale cress	cytosol	90.15	90.15
CDX79076	Canola	cytosol, peroxisome, plastid	55.08	89.05
KRH10765	Soybean	cytosol, peroxisome, plastid	76.31	76.31
VIT_00s0301g00170.t01	Wine grape	cytosol	72.92	74.29
GSMUA_Achr4P15790_001	Banana	cytosol	74.15	74.15
VIT_00s0301g00180.t01	Wine grape	cytosol	73.85	73.85
PGSC0003DMT400057744	Potato	cytosol	73.54	73.54
Solyc02g078940.2.1	Tomato	extracellular	73.23	73.23
TraesCS6D01G358100.1	Wheat	peroxisome	71.08	70.64
TraesCS6B01G411600.1	Wheat	peroxisome	71.08	70.64
TraesCS6A01G373900.1	Wheat	golgi	70.77	70.34
OQU85913	Sorghum	cytosol	70.15	69.51
Os02t0805600-01	Rice	plasma membrane	70.15	69.51
TraesCS6D01G358200.1	Wheat	cytosol	68.92	68.5
Zm00001d051987_P001	Maize	cytosol	63.08	66.99
TraesCS6B01G411700.1	Wheat	cytosol	67.08	66.67
Zm00001d018418_P002	Maize	cytosol	68.62	65.59
TraesCS6A01G374000.1	Wheat	cytosol	63.38	63.78
HORVU6Hr1G088160.7	Barley	cytosol, mitochondrion, peroxisome	68.31	63.61
VIT_14s0036g00560.t01	Wine grape	cytosol	27.08	55.35
VIT_09s0002g07690.t01	Wine grape	cytosol	30.15	54.14
VIT_09s0002g07840.t01	Wine grape	cytosol	44.62	50.17
VIT_09s0002g07580.t01	Wine grape	peroxisome	45.23	47.12
VIT_09s0002g07620.t01	Wine grape	cytosol	42.46	46.78
VIT_09s0070g00550.t01	Wine grape	cytosol	20.31	42.04
VIT_09s0002g07760.t01	Wine grape	cytosol	31.38	39.38
CDY34537	Canola	cytosol	28.31	27.96
CDX80695	Canola	cytosol	28.31	27.96
CDY47631	Canola	plastid	28.92	24.42
CDY61544	Canola	plastid	28.92	24.42
CDY68244	Canola	mitochondrion	13.23	23.63
CDX87218	Canola	cytosol	6.46	23.33
CDY32016	Canola	peroxisome	24.62	22.99
CDY16814	Canola	cytosol	6.15	22.22
CDY72063	Canola	plastid	13.54	20.95
CDX75808	Canola	mitochondrion	22.46	20.86
CDX67648	Canola	extracellular	14.15	20.54
CDX82448	Canola	mitochondrion	21.85	20.29
CDX97630	Canola	plastid	23.38	12.01
CDX98523	Canola	plastid	23.38	12.01

Protein Annotations

KEGG:00231+1.-.-.-	KEGG:00592+1.-.-.-	KEGG:00633+1.-.-.-	KEGG:00780+1.-.-.-	KEGG:00860+1.-.-.-	KEGG:00950+1.-.-.-
KEGG:00981+1.-.-.-	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	GO:A0A078D3L0	InterPro:ADH_C
InterPro:ADH_N	EnsemblPlants:CDX82839	ProteinID:CDX82839	ProteinID:CDX82839.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00138187001	InterPro:GroES-like_sf
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	PANTHER:PTHR43006	PANTHER:PTHR43006:SF7
InterPro:Quinone_OxRdtase_PIG3	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	TIGRFAMs:TIGR02824	UniParc:UPI0004EF03F4
SEG:seg	:	:	:	:	:

Description

BnaC01g12890D

Coordinates

chrLK031830:+:646138..647974

Molecular Weight (calculated)

34437.8 Da

IEP (calculated)

6.664

GRAVY (calculated)

0.114

Length

325 amino acids

Sequence
(BLAST)

001: MKAIVISEPG APEVLQLREV EDPQVKDDEV LIRVHATALN RADTLQRLGS YSPPPGSSPY PGLECSGTIE SVGNSVSRWK VGDQVCALLS GGGYAEKVAV
101: PVGQVLPVPA GVSLKDATAF PEVTCTVWST VFMMGRLSPA ESFLVHGGSS GIGTFAIQMA KHQGVRVFVT AGNEEKLAAC KELGADVCIN YKTEDFVARV
201: KAETDGKGVD VILDCIGAPY LQKNLDSLNF DGRLCIIGLM GGANAEIKLS SLLPKRLTVL GAALRPRSKE NKAVVVAEVE KTVWPAIEAG KVKPVIYKYL
301: PLSQAAEAHS LMESSSHIGK ILLVT

Best Arabidopsis Sequence Match ( AT4G21580.1 )
(BLAST)

001: MKAIVISEPG KPEVLQLRDV ADPEVKDDEV LIRVLATALN RADTLQRLGL YNPPPGSSPY LGLECSGTIE SVGKGVSRWK VGDQVCALLS GGGYAEKVSV
101: PAGQIFPIPA GISLKDAAAF PEVACTVWST VFMMGRLSVG ESFLIHGGSS GIGTFAIQIA KHLGVRVFVT AGSDEKLAAC KELGADVCIN YKTEDFVAKV
201: KAETDGKGVD VILDCIGAPY LQKNLDSLNF DGRLCIIGLM GGANAEIKLS SLLPKRLTVL GAALRPRSPE NKAVVVREVE KNVWPAIEAG KVKPVIYKYL
301: PLSQAAEGHS LMESSNHIGK ILLET

Arabidopsis Description

AT4g21580/F18E5_200 [Source:UniProtKB/TrEMBL;Acc:O65423]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.