Factsheet for VIT_09s0002g07690.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g07840.t01	Wine grape	cytosol	85.08	53.29
VIT_09s0070g00550.t01	Wine grape	cytosol	44.75	51.59
VIT_14s0036g00560.t01	Wine grape	cytosol	41.44	47.17
VIT_09s0002g07620.t01	Wine grape	cytosol	76.24	46.78
VIT_09s0002g07580.t01	Wine grape	peroxisome	80.11	46.47
CDX79076	Canola	cytosol, peroxisome, plastid	48.62	43.78
VIT_00s0301g00170.t01	Wine grape	cytosol	66.3	37.62
VIT_00s0301g00180.t01	Wine grape	cytosol	67.4	37.54
GSMUA_Achr4P15790_001	Banana	cytosol	58.01	32.31
KRH10765	Soybean	cytosol, peroxisome, plastid	57.46	32.0
Bra013540.1-P	Field mustard	cytosol	54.14	30.15
PGSC0003DMT400057744	Potato	cytosol	54.14	30.15
CDX82839	Canola	cytosol	54.14	30.15
Solyc02g078940.2.1	Tomato	extracellular	53.59	29.85
AT4G21580.1	Thale cress	cytosol	53.59	29.85
VIT_09s0002g07760.t01	Wine grape	cytosol	39.23	27.41
VIT_07s0151g00260.t01	Wine grape	cytosol	24.31	13.02
VIT_09s0002g08480.t01	Wine grape	cytosol	23.76	12.99
VIT_09s0002g08470.t01	Wine grape	cytosol	23.76	12.91
VIT_01s0127g00740.t01	Wine grape	plastid	24.86	11.94
VIT_07s0151g00090.t01	Wine grape	mitochondrion	24.86	11.75
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	15.47	11.29
VIT_19s0014g01890.t01	Wine grape	mitochondrion	20.44	10.25
VIT_15s0048g01710.t01	Wine grape	cytosol, peroxisome, plastid	18.23	10.03
VIT_13s0067g00160.t01	Wine grape	peroxisome	18.78	9.86
VIT_09s0002g07820.t01	Wine grape	cytosol	6.08	9.57

Protein Annotations

ArrayExpress:VIT_09s0002g07690	EMBL:FN596494	EnsemblPlants:VIT_09s0002g07690.t01	EnsemblPlantsGene:VIT_09s0002g07690	Gene3D:3.40.50.720	Gene3D:3.90.180.10
InterPro:GroES-like_sf	PANTHER:PTHR43006	PANTHER:PTHR43006:SF7	ProteinID:CCB59647	ProteinID:CCB59647.1	SUPFAM:SSF50129
UniParc:UPI000210A792	UniProt:F6HXH7	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr9:+:7893266..7895587

Molecular Weight (calculated)

18981.8 Da

IEP (calculated)

8.645

GRAVY (calculated)

0.071

Length

181 amino acids

Sequence
(BLAST)

001: MKAVVITTSG DPQVLQVQEV ENPEIGDDEV LSRVDAAAIN RTDTLQRKGL HPSSKAAVPT RVSNVCALLS GGGHAEKVAV PAGQVLPVLS GVSLKDAAGI
101: PEVACTVWST VLMMSRLSAG ETFLVHGGSI GIGTIYSNSE ILRSKGGKGW NSGTSKSFRF TCKAPYSARY RFLCSFGVES I

Best Arabidopsis Sequence Match ( AT4G21580.1 )
(BLAST)

001: MKAIVISEPG KPEVLQLRDV ADPEVKDDEV LIRVLATALN RADTLQRLGL YNPPPGSSPY LGLECSGTIE SVGKGVSRWK VGDQVCALLS GGGYAEKVSV
101: PAGQIFPIPA GISLKDAAAF PEVACTVWST VFMMGRLSVG ESFLIHGGSS GIGTFAIQIA KHLGVRVFVT AGSDEKLAAC KELGADVCIN YKTEDFVAKV
201: KAETDGKGVD VILDCIGAPY LQKNLDSLNF DGRLCIIGLM GGANAEIKLS SLLPKRLTVL GAALRPRSPE NKAVVVREVE KNVWPAIEAG KVKPVIYKYL
301: PLSQAAEGHS LMESSNHIGK ILLET

Arabidopsis Description

AT4g21580/F18E5_200 [Source:UniProtKB/TrEMBL;Acc:O65423]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.