Factsheet for VIT_09s0002g07820.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0301g00170.t01	Wine grape	cytosol	79.13	28.53
VIT_00s0301g00180.t01	Wine grape	cytosol	76.52	27.08
VIT_09s0002g07760.t01	Wine grape	cytosol	53.91	23.94
Zm00001d051987_P001	Maize	cytosol	62.61	23.53
Os02t0805600-01	Rice	plasma membrane	65.22	22.87
TraesCS6B01G411600.1	Wheat	peroxisome	63.48	22.32
TraesCS6D01G358100.1	Wheat	peroxisome	63.48	22.32
TraesCS6D01G358200.1	Wheat	cytosol	63.48	22.32
OQU85913	Sorghum	cytosol	63.48	22.26
TraesCS6A01G373900.1	Wheat	golgi	61.74	21.71
TraesCS6A01G374000.1	Wheat	cytosol	60.0	21.36
TraesCS6B01G411700.1	Wheat	cytosol	60.0	21.1
Zm00001d018418_P002	Maize	cytosol	61.74	20.88
VIT_09s0002g07580.t01	Wine grape	peroxisome	55.65	20.51
HORVU6Hr1G088160.7	Barley	cytosol, mitochondrion, peroxisome	60.87	20.06
VIT_09s0002g07840.t01	Wine grape	cytosol	42.61	16.95
VIT_09s0002g08470.t01	Wine grape	cytosol	31.3	10.81
VIT_09s0002g08480.t01	Wine grape	cytosol	30.43	10.57
VIT_09s0002g07620.t01	Wine grape	cytosol	24.35	9.49
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	19.13	8.87
VIT_13s0067g00160.t01	Wine grape	peroxisome	20.87	6.96
VIT_07s0151g00260.t01	Wine grape	cytosol	19.13	6.51
VIT_14s0036g00560.t01	Wine grape	cytosol	8.7	6.29
VIT_19s0014g01890.t01	Wine grape	mitochondrion	19.13	6.09
VIT_09s0002g07690.t01	Wine grape	cytosol	9.57	6.08
VIT_07s0151g00090.t01	Wine grape	mitochondrion	20.0	6.01
VIT_15s0048g01710.t01	Wine grape	cytosol, peroxisome, plastid	13.91	4.86
VIT_01s0127g00740.t01	Wine grape	plastid	14.78	4.51
VIT_09s0070g00550.t01	Wine grape	cytosol	0.87	0.64

Protein Annotations

ArrayExpress:VIT_09s0002g07820	EMBL:FN596494	EnsemblPlants:VIT_09s0002g07820.t01	EnsemblPlantsGene:VIT_09s0002g07820	Gene3D:3.90.180.10	GO:GO:0008150
GO:GO:0008152	GO:GO:0055114	InterPro:ADH_C	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43006	PANTHER:PTHR43006:SF7
PFAM:PF00107	ProteinID:CCB59656	ProteinID:CCB59656.1	SUPFAM:SSF51735	UniParc:UPI000210A79A	UniProt:F6HXI6
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr9:+:8221274..8233883

Molecular Weight (calculated)

12644.2 Da

IEP (calculated)

4.843

GRAVY (calculated)

0.026

Length

115 amino acids

Sequence
(BLAST)

001: MIKKKKGNVC INYKTEDFVA WVEETGGKGV DVILDNIGRA YFEGDIDSLN VDGTLFIIGF QGGTVAEVNL SGLLARCLTA YKYFPLTEAA EAHQLMESSK
101: HVGKIPCIQL CYGYE

Best Arabidopsis Sequence Match ( AT4G21580.2 )
(BLAST)

001: MKAIVISEPD TLQRLGLYNP PPGSSPYLGL ECSGTIESVG KGVSRWKVGD QVCALLSGGG YAEKVSVPAG QIFPIPAGIS LKDAAAFPEV ACTVWSTVFM
101: MGRLSVGESF LIHGGSSGIG TFAIQIAKHL GVRVFVTAGS DEKLAACKEL GADVCINYKT EDFVAKVKAE TDGKGVDVIL DCIGAPYLQK NLDSLNFDGR
201: LCIIGLMGGA NAEIKLSSLL PKRLTVLGAA LRPRSPENKA VVVREVEKNV WPAIEAGKVK PVIYKYLPLS QAAEGHSLME SSNHIGKILL ET

Arabidopsis Description

AT4g21580/F18E5_200 [Source:UniProtKB/TrEMBL;Acc:O65423]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.