Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_09s0002g07840.t01 | Wine grape | cytosol | 69.11 | 61.94 |
VIT_09s0002g07620.t01 | Wine grape | cytosol | 61.78 | 54.24 |
VIT_09s0002g07820.t01 | Wine grape | cytosol | 23.94 | 53.91 |
VIT_09s0070g00550.t01 | Wine grape | cytosol | 30.5 | 50.32 |
VIT_09s0002g07580.t01 | Wine grape | peroxisome | 56.76 | 47.12 |
VIT_00s0301g00170.t01 | Wine grape | cytosol | 51.74 | 42.01 |
VIT_00s0301g00180.t01 | Wine grape | cytosol | 52.51 | 41.85 |
VIT_09s0002g07690.t01 | Wine grape | cytosol | 27.41 | 39.23 |
GSMUA_Achr4P15790_001 | Banana | cytosol | 43.63 | 34.77 |
PGSC0003DMT400057744 | Potato | cytosol | 42.08 | 33.54 |
Solyc02g078940.2.1 | Tomato | extracellular | 42.08 | 33.54 |
KRH10765 | Soybean | cytosol, peroxisome, plastid | 41.31 | 32.92 |
Bra013540.1-P | Field mustard | cytosol | 39.38 | 31.38 |
CDX82839 | Canola | cytosol | 39.38 | 31.38 |
AT4G21580.1 | Thale cress | cytosol | 39.0 | 31.08 |
VIT_14s0036g00560.t01 | Wine grape | cytosol | 14.29 | 23.27 |
CDX79076 | Canola | cytosol, peroxisome, plastid | 17.76 | 22.89 |
VIT_09s0002g08470.t01 | Wine grape | cytosol | 18.53 | 14.41 |
VIT_09s0002g08480.t01 | Wine grape | cytosol | 17.37 | 13.6 |
VIT_07s0151g00260.t01 | Wine grape | cytosol | 15.44 | 11.83 |
VIT_13s0067g00160.t01 | Wine grape | peroxisome | 14.29 | 10.72 |
VIT_07s0151g00090.t01 | Wine grape | mitochondrion | 15.83 | 10.71 |
VIT_01s0127g00740.t01 | Wine grape | plastid | 15.44 | 10.61 |
VIT_19s0014g01890.t01 | Wine grape | mitochondrion | 13.51 | 9.7 |
VIT_15s0048g01710.t01 | Wine grape | cytosol, peroxisome, plastid | 11.97 | 9.42 |
VIT_07s0151g00200.t01 | Wine grape | cytosol, mitochondrion, plastid | 8.11 | 8.47 |
Protein Annotations
ArrayExpress:VIT_09s0002g07760 | EMBL:FN596494 | EnsemblPlants:VIT_09s0002g07760.t01 | EnsemblPlantsGene:VIT_09s0002g07760 | Gene3D:3.40.50.720 | Gene3D:3.90.180.10 |
InterPro:GroES-like_sf | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR43006 | PANTHER:PTHR43006:SF7 | ProteinID:CCB59652 | ProteinID:CCB59652.1 |
SUPFAM:SSF50129 | SUPFAM:SSF51735 | UniParc:UPI000210A796 | UniProt:F6HXI2 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr9:+:8103739..8106865
Molecular Weight (calculated)
28610.1 Da
IEP (calculated)
4.840
GRAVY (calculated)
-0.089
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MIATSGDPQV LQVQEVENPK IGDDEVLIRV DTATINRADT LQGKGLHPPS KAAVPTPASN VLESSKLLEG SSFDGRLAIR MLPVFLRLHI LFGFNDEPTV
101: CRRNIPGSWG FNWNWYVCYS NSEIPRSKDV CINYKTEDFV AWVEETGGKG IDVILDNIGR AYFEGDIDSF LLLVFKGGTV AEVNLSGLLA RCLTVQVAGL
201: QNRSLEKKSV IVSEVEKNVW PTITGVQVFS IDGSSRGSPA HGKQQAYWED TTYSIMLWL
101: CRRNIPGSWG FNWNWYVCYS NSEIPRSKDV CINYKTEDFV AWVEETGGKG IDVILDNIGR AYFEGDIDSF LLLVFKGGTV AEVNLSGLLA RCLTVQVAGL
201: QNRSLEKKSV IVSEVEKNVW PTITGVQVFS IDGSSRGSPA HGKQQAYWED TTYSIMLWL
001: MKAIVISEPD TLQRLGLYNP PPGSSPYLGL ECSGTIESVG KGVSRWKVGD QVCALLSGGG YAEKVSVPAG QIFPIPAGIS LKDAAAFPEV ACTVWSTVFM
101: MGRLSVGESF LIHGGSSGIG TFAIQIAKHL GVRVFVTAGS DEKLAACKEL GADVCINYKT EDFVAKVKAE TDGKGVDVIL DCIGAPYLQK NLDSLNFDGR
201: LCIIGLMGGA NAEIKLSSLL PKRLTVLGAA LRPRSPENKA VVVREVEKNV WPAIEAGKVK PVIYKYLPLS QAAEGHSLME SSNHIGKILL ET
101: MGRLSVGESF LIHGGSSGIG TFAIQIAKHL GVRVFVTAGS DEKLAACKEL GADVCINYKT EDFVAKVKAE TDGKGVDVIL DCIGAPYLQK NLDSLNFDGR
201: LCIIGLMGGA NAEIKLSSLL PKRLTVLGAA LRPRSPENKA VVVREVEKNV WPAIEAGKVK PVIYKYLPLS QAAEGHSLME SSNHIGKILL ET
Arabidopsis Description
AT4g21580/F18E5_200 [Source:UniProtKB/TrEMBL;Acc:O65423]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.