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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_09s0002g07840.t01 Wine grape cytosol 69.11 61.94
VIT_09s0002g07620.t01 Wine grape cytosol 61.78 54.24
VIT_09s0002g07820.t01 Wine grape cytosol 23.94 53.91
VIT_09s0070g00550.t01 Wine grape cytosol 30.5 50.32
VIT_09s0002g07580.t01 Wine grape peroxisome 56.76 47.12
VIT_00s0301g00170.t01 Wine grape cytosol 51.74 42.01
VIT_00s0301g00180.t01 Wine grape cytosol 52.51 41.85
VIT_09s0002g07690.t01 Wine grape cytosol 27.41 39.23
GSMUA_Achr4P15790_001 Banana cytosol 43.63 34.77
PGSC0003DMT400057744 Potato cytosol 42.08 33.54
Solyc02g078940.2.1 Tomato extracellular 42.08 33.54
KRH10765 Soybean cytosol, peroxisome, plastid 41.31 32.92
Bra013540.1-P Field mustard cytosol 39.38 31.38
CDX82839 Canola cytosol 39.38 31.38
AT4G21580.1 Thale cress cytosol 39.0 31.08
VIT_14s0036g00560.t01 Wine grape cytosol 14.29 23.27
CDX79076 Canola cytosol, peroxisome, plastid 17.76 22.89
VIT_09s0002g08470.t01 Wine grape cytosol 18.53 14.41
VIT_09s0002g08480.t01 Wine grape cytosol 17.37 13.6
VIT_07s0151g00260.t01 Wine grape cytosol 15.44 11.83
VIT_13s0067g00160.t01 Wine grape peroxisome 14.29 10.72
VIT_07s0151g00090.t01 Wine grape mitochondrion 15.83 10.71
VIT_01s0127g00740.t01 Wine grape plastid 15.44 10.61
VIT_19s0014g01890.t01 Wine grape mitochondrion 13.51 9.7
VIT_15s0048g01710.t01 Wine grape cytosol, peroxisome, plastid 11.97 9.42
VIT_07s0151g00200.t01 Wine grape cytosol, mitochondrion, plastid 8.11 8.47
Protein Annotations
ArrayExpress:VIT_09s0002g07760EMBL:FN596494EnsemblPlants:VIT_09s0002g07760.t01EnsemblPlantsGene:VIT_09s0002g07760Gene3D:3.40.50.720Gene3D:3.90.180.10
InterPro:GroES-like_sfInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR43006PANTHER:PTHR43006:SF7ProteinID:CCB59652ProteinID:CCB59652.1
SUPFAM:SSF50129SUPFAM:SSF51735UniParc:UPI000210A796UniProt:F6HXI2MapMan:35.2:
Description
No Description!
Coordinates
chr9:+:8103739..8106865
Molecular Weight (calculated)
28610.1 Da
IEP (calculated)
4.840
GRAVY (calculated)
-0.089
Length
259 amino acids
Sequence
(BLAST)
001: MIATSGDPQV LQVQEVENPK IGDDEVLIRV DTATINRADT LQGKGLHPPS KAAVPTPASN VLESSKLLEG SSFDGRLAIR MLPVFLRLHI LFGFNDEPTV
101: CRRNIPGSWG FNWNWYVCYS NSEIPRSKDV CINYKTEDFV AWVEETGGKG IDVILDNIGR AYFEGDIDSF LLLVFKGGTV AEVNLSGLLA RCLTVQVAGL
201: QNRSLEKKSV IVSEVEKNVW PTITGVQVFS IDGSSRGSPA HGKQQAYWED TTYSIMLWL
Best Arabidopsis Sequence Match ( AT4G21580.2 )
(BLAST)
001: MKAIVISEPD TLQRLGLYNP PPGSSPYLGL ECSGTIESVG KGVSRWKVGD QVCALLSGGG YAEKVSVPAG QIFPIPAGIS LKDAAAFPEV ACTVWSTVFM
101: MGRLSVGESF LIHGGSSGIG TFAIQIAKHL GVRVFVTAGS DEKLAACKEL GADVCINYKT EDFVAKVKAE TDGKGVDVIL DCIGAPYLQK NLDSLNFDGR
201: LCIIGLMGGA NAEIKLSSLL PKRLTVLGAA LRPRSPENKA VVVREVEKNV WPAIEAGKVK PVIYKYLPLS QAAEGHSLME SSNHIGKILL ET
Arabidopsis Description
AT4g21580/F18E5_200 [Source:UniProtKB/TrEMBL;Acc:O65423]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.