Factsheet for VIT_09s0002g08470.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g08480.t01	Wine grape	cytosol	87.99	88.52
PGSC0003DMT400055608	Potato	cytosol, peroxisome, plastid	78.38	79.82
Bra035926.1-P	Field mustard	cytosol	74.47	76.54
CDY16814	Canola	cytosol	20.42	75.56
CDX87218	Canola	cytosol	19.82	73.33
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane, vacuole	62.46	72.47
KRH27530	Soybean	nucleus	77.78	68.88
Solyc06g034120.2.1	Tomato	extracellular	78.98	68.49
Os03t0101600-01	Rice	plasma membrane	69.67	67.25
Zm00001d027276_P001	Maize	extracellular	71.17	63.71
HORVU4Hr1G088610.1	Barley	plastid	70.57	62.33
KXG40429	Sorghum	plastid	71.77	62.24
TraesCS5A01G542400.1	Wheat	plastid	70.27	61.9
AT5G61510.1	Thale cress	plastid	75.38	61.82
TraesCS4D01G365600.1	Wheat	plastid	70.27	61.26
TraesCS4B01G371900.1	Wheat	mitochondrion, plastid	69.37	59.69
CDY68244	Canola	mitochondrion	30.03	54.95
CDY72063	Canola	plastid	30.33	48.1
VIT_09s0002g07820.t01	Wine grape	cytosol	10.81	31.3
VIT_00s0301g00180.t01	Wine grape	cytosol	30.33	31.08
VIT_00s0301g00170.t01	Wine grape	cytosol	29.43	30.72
VIT_14s0036g00560.t01	Wine grape	cytosol	12.31	25.79
VIT_15s0048g01710.t01	Wine grape	cytosol, peroxisome, plastid	24.02	24.32
VIT_09s0002g07690.t01	Wine grape	cytosol	12.91	23.76
VIT_07s0151g00260.t01	Wine grape	cytosol	24.02	23.67
VIT_13s0067g00160.t01	Wine grape	peroxisome	23.42	22.61
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	16.82	22.58
VIT_07s0151g00090.t01	Wine grape	mitochondrion	24.62	21.41
VIT_01s0127g00740.t01	Wine grape	plastid	24.02	21.22
VIT_09s0002g07840.t01	Wine grape	cytosol	18.32	21.11
VIT_09s0002g07580.t01	Wine grape	peroxisome	19.22	20.51
VIT_19s0014g01890.t01	Wine grape	mitochondrion	20.72	19.11
VIT_09s0002g07620.t01	Wine grape	cytosol	16.52	18.64
VIT_09s0002g07760.t01	Wine grape	cytosol	14.41	18.53
VIT_09s0070g00550.t01	Wine grape	cytosol	7.81	16.56

Protein Annotations

EntrezGene:100252700	wikigene:100252700	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C
InterPro:ADH_N	EMBL:AM450920	ProteinID:CAN72117	ProteinID:CAN72117.1	ProteinID:CCB59686	ProteinID:CCB59686.1
UniProt:F6HXM9	EMBL:FN596494	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0003960	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0017091
GO:GO:0034599	GO:GO:0055114	InterPro:GroES-like_sf	EntrezGene:LOC100252700	wikigene:LOC100252700	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	PANTHER:PTHR42975	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI00015CC21B	ArrayExpress:VIT_09s0002g08470	EnsemblPlantsGene:VIT_09s0002g08470	EnsemblPlants:VIT_09s0002g08470.t01	unigene:Vvi.25420
RefSeq:XP_002270933	RefSeq:XP_002270933.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr9:-:9506830..9516709

Molecular Weight (calculated)

35449.9 Da

IEP (calculated)

6.784

GRAVY (calculated)

0.148

Length

333 amino acids

Sequence
(BLAST)

001: MVKTIRVYEL GGPEVLKWED VQIGEPNEGE IRVKIQAIGL NFVDVYIRKG VYKIATMPFT PGVEAAGVVT AVGPGITGWK VGDVVAYAGG SMGSYSEEQI
101: LPANKVVPLP PSINPTVGAS IMVKGMTVHY LVRCCFKVEP GHIVLVHAAA GGVGSLLCQW ANALGATVIG TVSTNEKAVQ AKEDGCHHVI IYKEEDFVAR
201: VNEITSGNGV HVVYDSVGKD TFQGSLACLR PRGFMVNFGQ SSGTPDPVPL PSLGAKALFL TRPSLMHYSA TRDDLLEAAG EVFANVASGV LRVRVNHKYP
301: LSQAAQAHAD LESRKTSGSV VLIPDCLWQD ILN

Best Arabidopsis Sequence Match ( AT5G61510.1 )
(BLAST)

001: MAALTLHHHH HHRHHSCLQA SGHLSRRLYH RIFSSFPRNP VKDLNFRLSL ADFSSFSLST RGTVFAVRAL STVAVEESSE KKMVKGIRVY EHGGPEVLKW
101: EDVEVGEPKE GEIRVKNKAI GLNFIDVYFR KGVYKPASMP FTPGMEAVGE VVAVGSGLTG RMIGDLVAYA GNPMGAYAEE QILPADKVVP VPSSIDPIVA
201: ASIMLKGMTA QFLLRRCFKV EPGHTILVHA AAGGVGSLLC QWANALGATV IGTVSTNEKA AQAKEDGCHH VIMYKNEDFV SRVNDITSGK GVNVVYDSVG
301: KDTFKGSLAC LKSRGYMVSF GQSSGSPDPI PLSDLAPKSL FLTRPSMMHY NETRDELLEC AGEVFANVTS GILKARVNHK YPLSRVADAH ADLENRITSG
401: SVVLLP

Arabidopsis Description

At5g61510 [Source:UniProtKB/TrEMBL;Acc:A1L4Y4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.